[kepler-users] Status of Kepler-2.0?
ben leinfelder
leinfelder at nceas.ucsb.edu
Tue Mar 30 18:51:46 PDT 2010
Tom,
While different versions of R do have subtle differences that can
cause undesired behavior of the RExpression actor, I actually think
it's not that esoteric of an issue that you're encountering.
I've tried running the 00-StatisticalSummary.xml workflow with Kepler
1.0 and R 2.10.1 in the PATH on my system and it worked just fine.
Can you verify that R is indeed on your PATH?
Thanks,
-ben
On Mar 30, 2010, at 2:22 PM, Matt Jones wrote:
> Hi Tom,
>
> Kepler 2.0.0 is being prepared for release, and is going through
> testing. For that purpose, we are developing a series of release
> candidates. These will not be supported after 2.0.0 comes out, but
> any issues you find with them would be valuable to report to kepler-
> dev to improve the quality of the release. Discussion of the new
> release occurs on kepler-dev rather than kepler-users.
>
> For 1.0.0, the reason that you are probably having trouble is your R
> version. Kepler 1.0.0 shipped with an earlier version of R (2.6.2),
> and the R actor was fairly sensitive to the particular version used
> (because different R versions serialize their output differently).
> I believe that Ben has upgraded to R 2.10 for the 2.0.0 release
> series (hopefully he'll confirm), which is why things probably work
> now for you. This is just a guess on my part, but likely is related
> to the problem. If you want 1.0.0 to work, install a parallel copy
> of the old version of R and put it first on your path and I'll bet
> Kepler 1.0.0's R functionality will work for you again.
>
> Matt
>
> On Tue, Mar 30, 2010 at 1:05 PM, Tom Wainwright <Thomas.Wainwright at noaa.gov
> > wrote:
> Hi,
>
> I have been trying to use Kepler 1.0.0 to organize some complicated
> R-based analyses, and have run into some problems. In particular,
> the "getting-started" example "00-StatisticalSummary.xml" produces
> no output, and results in NullPointerException errors in the
> RExpression class. (It worked last year, but not now--I am
> currently running Fedora-11 x86_64 Linux, with R version 2.10.1 and
> java version "1.6.0_17" OpenJDK.)
>
> Poking about, I found Kepler-2.0-RC1 on http://dist.kepler-project.org/dist
> . I downloaded and ran it, and my problem seems to be fixed.
>
> I haven't seen any public announcement about availability of the
> RC. Is this something that is useable at this point? For learning
> and early development, should I go ahead and use it, assuming bugs
> will be fixed in the near future?
>
> Thanks!
>
> --
> Tom Wainwright
> NOAA Northwest Fisheries Science Center
> ~
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> The contents of this message are mine personally and do not
> necessarily
> reflect any position of the Government or the National Oceanic and
> Atmospheric Administration.
> ~
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