[kepler-users] Using NCBI Entrez web services

[Jianwu Wang]

Hi Panickos,

    There is a RESTful Service actor in Kepler trunk. You should be able 
to find it by searching 'Service'.

Best wishes

Sincerely yours

Jianwu Wang
jianwu at sdsc.edu
http://users.sdsc.edu/~jianwu/

Scientific Workflow Automation Technologies (SWAT) Laboratory
San Diego Supercomputer Center 
University of California, San Diego
San Diego, CA, U.S.A. 



Panickos Neophytou wrote:
> Thanks Daniel,
>
> I was wondering if there's any way to use the REST method, using just
> the URL with some query parameters. Is there an actor for doing this?
> And maybe have the query part of the URL be generated somehow by the
> upstream actors of the workflow...
>
> If this is not possible, then how long do you think it is going to
> take to fix the Web Service Actor? Should I pause this and wait for
> your update or should I try something different?
>
> Cheers,
> Panickos
>
> On Sat, Sep 12, 2009 at 9:42 PM, Daniel Crawl <crawl at sdsc.edu> wrote:
>   
>> Hi Panickos,
>>
>> I'm in the process of updating the web service actor to
>> work with the NCBI web services. I'll let you know when
>> I'm done.
>>
>>  --dan
>>
>>
>>
>> Panickos Neophytou wrote:
>>     
>>> Hi,
>>>
>>> I'm new to kepler and I was wondering if anyone has a sample workflow
>>> using eSearch and eFetch for some any of their databases. I tried a
>>> few thing and I also didn't find anything on the web about this.
>>>
>>> Thanks,
>>> Panickos
>>> _______________________________________________
>>> Kepler-users mailing list
>>> Kepler-users at kepler-project.org
>>> http://mercury.nceas.ucsb.edu/kepler/mailman/listinfo/kepler-users
>>>
>>>       
>>     
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