[seek-dev] data

Jing Tao tao at nceas.ucsb.edu
Wed Nov 9 11:18:07 PST 2005


No return? Did you see any error in kepler? Now it seems xercesImpl.jar 
and xalan.jar cause the problem in kepler. I am wondering if this breaks 
the search too.

Thanks,

Jing

Jing Tao
National Center for Ecological
Analysis and Synthesis (NCEAS)
735 State St. Suite 204
Santa Barbara, CA 93101

On Wed, 9 Nov 2005, Deana Pennington wrote:

> Date: Wed, 09 Nov 2005 11:28:23 -0700
> From: Deana Pennington <dpennington at lternet.edu>
> To: Jing Tao <tao at nceas.ucsb.edu>
> Cc: Matt Jones <jones at nceas.ucsb.edu>, seek-dev <seek-dev at ecoinformatics.org>
> Subject: Re: [seek-dev] data
> 
> I just tried a few minutes ago, and get no returns on any searches, either. 
> When I tried earlier, it might have been the caching problem again.  I'll 
> check again after the search is working again and let you know.
>
> Deana
>
>
> Jing Tao wrote:
>
>> Hi, Deana:
>> 
>> When did you do the search? My kepler has compile problem and couldn't 
>> search now.
>> 
>> Thanks,
>> 
>> Jing
>> 
>> Jing Tao
>> National Center for Ecological
>> Analysis and Synthesis (NCEAS)
>> 735 State St. Suite 204
>> Santa Barbara, CA 93101
>> 
>> On Wed, 9 Nov 2005, Deana Pennington wrote:
>> 
>>> Date: Wed, 09 Nov 2005 10:40:32 -0700
>>> From: Deana Pennington <dpennington at lternet.edu>
>>> To: Jing Tao <tao at nceas.ucsb.edu>
>>> Cc: Matt Jones <jones at nceas.ucsb.edu>, seek-dev 
>>> <seek-dev at ecoinformatics.org>
>>> Subject: Re: [seek-dev] data
>>> 
>>> Jing,
>>> 
>>> The upgrade didn't fix the problem...
>>> 
>>> Deana
>>> 
>>> 
>>> Jing Tao wrote:
>>> 
>>>> Hi, Deana:
>>>> 
>>>> Yep, somehow the 34.7 didn't go to ecogrid metacat. I guess this is 
>>>> because knb metacat was upgrade but ecogrid metacat haven't. I will try 
>>>> to upgrade today.
>>>> 
>>>> Thanks,
>>>> 
>>>> Jing
>>>> 
>>>> Jing Tao
>>>> National Center for Ecological
>>>> Analysis and Synthesis (NCEAS)
>>>> 735 State St. Suite 204
>>>> Santa Barbara, CA 93101
>>>> 
>>>> On Tue, 8 Nov 2005, Deana Pennington wrote:
>>>> 
>>>>> Date: Tue, 08 Nov 2005 15:55:50 -0700
>>>>> From: Deana Pennington <dpennington at lternet.edu>
>>>>> To: Matt Jones <jones at nceas.ucsb.edu>
>>>>> Cc: Jing Tao <tao at nceas.ucsb.edu>, seek-dev 
>>>>> <seek-dev at ecoinformatics.org>
>>>>> Subject: Re: [seek-dev] data
>>>>> 
>>>>> Nope, that's not it.  Deleted my cache and still getting 34.6 instead of 
>>>>> 34.7.  Deana
>>>>> 
>>>>> 
>>>>> Matt Jones wrote:
>>>>> 
>>>>>> And this is hopefully being fixed by Kevin.  Resultsets need to expire 
>>>>>> quickly -- they probably shouldn't be cached for very long, while more 
>>>>>> immutable objects like data files can be cached much longer.
>>>>>> 
>>>>>> Matt
>>>>>> 
>>>>>> Jing Tao wrote:
>>>>>> 
>>>>>>> Hi, deana:
>>>>>>> 
>>>>>>> I will take look soon. But did you delete the cache before you search? 
>>>>>>> Othewise it will use the cache result. The chache dir is in 
>>>>>>> yourhomedirecotry/.kepler
>>>>>>> 
>>>>>>> Thanks,
>>>>>>> 
>>>>>>> Jing
>>>>>>> 
>>>>>>> Jing Tao
>>>>>>> National Center for Ecological
>>>>>>> Analysis and Synthesis (NCEAS)
>>>>>>> 735 State St. Suite 204
>>>>>>> Santa Barbara, CA 93101
>>>>>>> 
>>>>>>> On Tue, 8 Nov 2005, Deana Pennington wrote:
>>>>>>> 
>>>>>>> 
>>>>>>>> Date: Tue, 08 Nov 2005 15:31:23 -0700
>>>>>>>> From: Deana Pennington <dpennington at lternet.edu>
>>>>>>>> To: seek-dev <seek-dev at ecoinformatics.org>
>>>>>>>> Subject: [seek-dev] data
>>>>>>>> 
>>>>>>>> I confess to being baffled (not a confession I like to make :-)
>>>>>>>> 
>>>>>>>> I have a file on the SRB with an associated EML file in metacat.  The
>>>>>>>> original eml had an error in the distribution url.  I edited the url 
>>>>>>>> and
>>>>>>>> nothing else.  The new eml file shows up on the knb website search.
>>>>>>>> Kepler, however, keeps retrieving the old eml file.  I have the exact
>>>>>>>> same issue with other files as well.  The known problem files are all
>>>>>>>> IPCC climate change data:
>>>>>>>> 
>>>>>>>> dpennington.34.7 (kepler retrieves 34.6)
>>>>>>>>     70.5 (70.4)
>>>>>>>>     88.2 (88.1)
>>>>>>>>    124.2 (124.1)
>>>>>>>> and others
>>>>>>>> 
>>>>>>>> If you search on "ipcc" in Kepler, the first return is 70.4.  If you
>>>>>>>> search for dpennington.34.7, you get no return.
>>>>>>>> 
>>>>>>>> In all of the above cases, the original url had an extra period in 
>>>>>>>> the
>>>>>>>> filename which I replaced with an underscore...no other changes made. 
>>>>>>>> I
>>>>>>>> validated the new file with the knb tool...no problems found. 
>>>>>>>> Compared
>>>>>>>> the new file in knb with the old file in kepler..see no differences
>>>>>>>> other than the underscore.
>>>>>>>> 
>>>>>>>> Ideas or suggestions?
>>>>>>>> 
>>>>>>>> Deana
>>>>>>>> 
>>>>>>>> -- 
>>>>>>>> ********
>>>>>>>> 
>>>>>>>> Deana D. Pennington, PhD
>>>>>>>> Long-term Ecological Research Network Office
>>>>>>>> 
>>>>>>>> UNM Biology Department
>>>>>>>> MSC03  2020
>>>>>>>> 1 University of New Mexico
>>>>>>>> Albuquerque, NM  87131-0001
>>>>>>>> 
>>>>>>>> 505-277-2595 (office)
>>>>>>>> 505-249-2604 (cell)
>>>>>>>> 505 277-2541 (fax)
>>>>>>>> 
>>>>>>>> _______________________________________________
>>>>>>>> Seek-dev mailing list
>>>>>>>> Seek-dev at ecoinformatics.org
>>>>>>>> http://mercury.nceas.ucsb.edu/ecoinformatics/mailman/listinfo/seek-dev 
>>>>>>>> 
>>>>>>> 
>>>>>>> _______________________________________________
>>>>>>> Seek-dev mailing list
>>>>>>> Seek-dev at ecoinformatics.org
>>>>>>> http://mercury.nceas.ucsb.edu/ecoinformatics/mailman/listinfo/seek-dev 
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> 
>>>>> 
>>>>> 
>>>>> -- 
>>>>> ********
>>>>> 
>>>>> Deana D. Pennington, PhD
>>>>> Long-term Ecological Research Network Office
>>>>> 
>>>>> UNM Biology Department
>>>>> MSC03  2020
>>>>> 1 University of New Mexico
>>>>> Albuquerque, NM  87131-0001
>>>>> 
>>>>> 505-277-2595 (office)
>>>>> 505-249-2604 (cell)
>>>>> 505 277-2541 (fax)
>>>>> 
>>>>> 
>>> 
>>> 
>>> -- 
>>> ********
>>> 
>>> Deana D. Pennington, PhD
>>> Long-term Ecological Research Network Office
>>> 
>>> UNM Biology Department
>>> MSC03  2020
>>> 1 University of New Mexico
>>> Albuquerque, NM  87131-0001
>>> 
>>> 505-277-2595 (office)
>>> 505-249-2604 (cell)
>>> 505 277-2541 (fax)
>>> 
>>> 
>
>
> -- 
> ********
>
> Deana D. Pennington, PhD
> Long-term Ecological Research Network Office
>
> UNM Biology Department
> MSC03  2020
> 1 University of New Mexico
> Albuquerque, NM  87131-0001
>
> 505-277-2595 (office)
> 505-249-2604 (cell)
> 505 277-2541 (fax)
>
>
>


More information about the Seek-dev mailing list