[kepler-dev] help with finding newly created actor
Arcot Rajasekar
sekar at sdsc.edu
Wed Jun 6 11:39:16 PDT 2007
okay. sounds good.
raja
On Wed, 6 Jun 2007, Unni Pillai wrote:
> Hi Raja
>
> No worries SDSC SRB stuff and Kepler works fine, it was just idiotic
> usage on my end. © was just weak attempt to render the
> copyright icon. So © has nothing to do with SRB interaction.
> And getting my actor to do some useful stuff is to automate my mets
> wrappers etc.
>
> Thanks
> Unni
>
>
> On Jun 6, 2007, at 2:03 PM, Arcot Rajasekar wrote:
>
> >
> >
> > Hi Unni
> > That sounds great. Now for the really hard work :-)
> > BTW, is "©" coming because of some SRB interaction.....
> >
> > raja
> >
> > On Wed, 6 Jun 2007, Unni Pillai wrote:
> >
> >> Thanks
> >>
> >> Will avoid HTML markups like © within xml files :-( and
> >> additionally my file was missing </property> tag also
> >> My new actor is visible and now the hard part making it do some
> >> useful stuff :-)
> >>
> >> Unni
> >> On Jun 6, 2007, at 1:26 PM, Chad Berkley wrote:
> >>
> >>> There was an entity "©" in one of the properties that was
> >>> causing a problem. I removed it. I also put a comment in the xml
> >>> saying that you should replace the "documentation" property with a
> >>> KeplerDocumentation property. You can find an example in one of
> >>> the other moml files in src/actors.
> >>>
> >>> hope that helps,
> >>> chad
> >>>
> >>> Unni Pillai wrote:
> >>>> Thanks for the clarification
> >>>> I'm sending the moml file as attachment
> >>>> -------------------------------------------------------------------
> >>>> --
> >>>> ---
> >>>> On Jun 6, 2007, at 1:08 PM, Chad Berkley wrote:
> >>>>> the src/actor/xxx/xxx.xml file is the moml file.
> >>>>>
> >>>>> Unni Pillai wrote:
> >>>>>> Hi Chad
> >>>>>> A foolish question, where exactly can I find the moml file (is
> >>>>>> it under Ptolemy) since I've been only working with *.java and
> >>>>>> *.xml within kepler src
> >>>>>> Thanks
> >>>>>> Unni
> >>>>>> On Jun 6, 2007, at 12:55 PM, Chad Berkley wrote:
> >>>>>>> can you send me your moml file? I'll take a look at it.
> >>>>>>>
> >>>>>>> chad
> >>>>>>>
> >>>>>>> Unni Pillai wrote:
> >>>>>>>> Hello
> >>>>>>>> I created a new actor following the examples on Kepler
> >>>>>>>> Tutorials <http://www.kepler-project.org/Wiki.jsp?
> >>>>>>>> page=KeplerDevelopersTutorial>. I was able to create and
> >>>>>>>> verify tutorial samples.
> >>>>>>>> However I created a brand new actor called SRBMets and while
> >>>>>>>> firing up kepler using ant run-dev I'm getting the following
> >>>>>>>> error
> >>>>>>>> [java] com.microstar.xml.XmlException: reference to undeclared
> >>>>>>>> entity (found "copy") in [external stream] at line 17 and
> >>>>>>>> column 11
> >>>>>>>> [java] at ptolemy.moml.MoMLParser.error
> >>>>>>>> (MoMLParser.java:1006)
> >>>>>>>> [java] at com.microstar.xml.XmlParser.error
> >>>>>>>> (XmlParser.java:448)
> >>>>>>>> [java] at com.microstar.xml.XmlParser.parseEntityRef
> >>>>>>>> (XmlParser.java:1625)
> >>>>>>>> [java] at com.microstar.xml.XmlParser.parseContent
> >>>>>>>> (XmlParser.java:1061)
> >>>>>>>> [java] Unable to process kar file: /Users/unni/Documents/
> >>>>>>>> projects/ndiipp-ptv/kepler/kar/actors/SRBMets.kar
> >>>>>>>> Any ideas on how to debug this since I'm a relative newbie to
> >>>>>>>> kepler. I'm suspecting that my kepler/src/actors/SRBMets.xml
> >>>>>>>> file probably has some subtle error I'm providing the result
> >>>>>>>> of cat src/actors/README
> >>>>>>>> asterix:~/Documents/projects/ndiipp-ptv/kepler unni$ cat src/
> >>>>>>>> actors/README
> >>>>>>>> The last known id for an actor is actor:519
> >>>>>>>> The last known id for an kar is kar:519
> >>>>>>>> Please update these ids if you add new actors to this
> >>>>>>>> directory so the next person will know what the next ids to
> >>>>>>>> use are.
> >>>>>>>> and some corresponding snippet from my SRBMets.xml
> >>>>>>>> <entity name="SRBMets"
> >>>>>>>> class="ptolemy.kernel.ComponentEntity">
> >>>>>>>> <property name="entityId"
> >>>>>>>> value="urn:lsid:kepler-project.org:actor:520:1"
> >>>>>>>> class="org.kepler.moml.NamedObjId"/>
> >>>>>>>> And following other SRBActors examples I ended up cutting and
> >>>>>>>> pasting the following <property name="semanticType00"
> >>>>>>>> value="urn:lsid:localhost:onto:1:1#SRBExternalInputActor"
> >>>>>>>> class="org.kepler.sms.SemanticType"/>
> >>>>>>>> <property name="semanticType11"
> >>>>>>>> value="urn:lsid:localhost:onto:2:1#DatabaseInputFunction"
> >>>>>>>> class="org.kepler.sms.SemanticType"/>
> >>>>>>>> <property name="semanticType22"
> >>>>>>>> value="urn:lsid:localhost:onto:2:1#DatabaseOutputFunction"
> >>>>>>>> class="org.kepler.sms.SemanticType"/>
> >>>>>>>> Thanks in advance for any insights.
> >>>>>>>> Unni
> >>>>>>>> ---------------------------------------------------------------
> >>>>>>>> --
> >>>>>>>> -------
> >>>>>>>> _______________________________________________
> >>>>>>>> Kepler-dev mailing list
> >>>>>>>> Kepler-dev at ecoinformatics.org
> >>>>>>>> http://mercury.nceas.ucsb.edu/ecoinformatics/mailman/listinfo/
> >>>>>>>> kepler-dev
> >>> <?xml version="1.0"?>
> >>> <entity name="SRBMets"
> >>> class="ptolemy.kernel.ComponentEntity">
> >>> <property name="entityId"
> >>> value="urn:lsid:kepler-project.org:actor:520:1"
> >>> class="org.kepler.moml.NamedObjId"/>
> >>>
> >>> <!--You should change this documentation attribute to use the new
> >>> KeplerDocumentation
> >>> format. Look at another moml file in the src/actors directory for
> >>> an example-->
> >>>
> >>> <property name="documentation"
> >>> class="org.kepler.moml.DocumentationAttribute">
> >>> <property name="author"
> >>> class="ptolemy.kernel.util.ConfigurableAttribute">
> >>> <configure>Unni Pillai</configure></property>
> >>> <property name="version"
> >>> class="ptolemy.kernel.util.ConfigurableAttribute">
> >>> <configure>$ID:$</configure></property>
> >>> <property name="copyright"
> >>> class="ptolemy.kernel.util.ConfigurableAttribute">
> >>> <configure> 2007 New York University</configure></property>
> >>> <property name="userLevelDocumentation"
> >>> class="ptolemny.kernel.util.ConfigurableAttribute">
> >>> <configure>
> >>> <p>The SRBMets actor generates a mets file for given directory
> >>> (collection) within SRB system.</p>
> >>> </configure>
> >>> </property>
> >>> </property>
> >>> <property name="class" value="edu.nyu.tutorial.SRBMets"
> >>> class="ptolemy.kernel.util.StringAttribute">
> >>> <property name="id"
> >>> value="urn:lsid:kepler-project.org:class:520:1"
> >>> class="ptolemy.kernel.util.StringAttribute"/>
> >>> </property>
> >>> <property name="SRBFileSystem"
> >>> class="org.kepler.moml.PortAttribute">
> >>> <property name="direction"
> >>> value="input" class="ptolemy.kernel.util.StringAttribute"/>
> >>> <property name="dataType"
> >>> value="general" class="ptolemy.kernel.util.StringAttribute"/>
> >>> <property name="isMultiport"
> >>> value="false" class="ptolemy.kernel.util.StringAttribute"/>
> >>> <property name="_showName" class="ptolemy.kernel.util.Attribute"/>
> >>> </property>
> >>> <property name="path" class="org.kepler.moml.PortAttribute">
> >>> <property name="direction"
> >>> value="input" class="ptolemy.kernel.util.StringAttribute"/>
> >>> <property name="dataType"
> >>> value="{string}" class="ptolemy.kernel.util.StringAttribute"/>
> >>> <property name="isMultiport"
> >>> value="false" class="ptolemy.kernel.util.StringAttribute"/>
> >>> <property name="_showName" class="ptolemy.kernel.util.Attribute"/>
> >>> </property>
> >>> <property name="exitCode" class="org.kepler.moml.PortAttribute">
> >>> <property name="direction"
> >>> value="output" class="ptolemy.kernel.util.StringAttribute"/>
> >>> <property name="dataType"
> >>> value="string" class="ptolemy.kernel.util.StringAttribute"/>
> >>> <property name="isMultiport"
> >>> value="false" class="ptolemy.kernel.util.StringAttribute"/>
> >>> <property name="_showName" class="ptolemy.kernel.util.Attribute"/>
> >>> </property>
> >>> <property name="semanticType00"
> >>> value="urn:lsid:localhost:onto:1:1#SRBExternalInputActor"
> >>> class="org.kepler.sms.SemanticType"/>
> >>> <property name="semanticType11"
> >>> value="urn:lsid:localhost:onto:2:1#DatabaseInputFunction"
> >>> class="org.kepler.sms.SemanticType"/>
> >>> <property name="semanticType22"
> >>> value="urn:lsid:localhost:onto:2:1#DatabaseOutputFunction"
> >>> class="org.kepler.sms.SemanticType"/>
> >>> </entity>
> >>>
> >>>
> >>>
> >>
> >> _______________________________________________
> >> Kepler-dev mailing list
> >> Kepler-dev at ecoinformatics.org
> >> http://mercury.nceas.ucsb.edu/ecoinformatics/mailman/listinfo/
> >> kepler-dev
> >>
> >
>
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