[kepler-dev] build error with latest cvs copy of ptII and kepler ....

jagan Jagan.Kommineni at infotech.monash.edu.au
Wed Jun 21 18:22:37 PDT 2006


Thnaks to both Dan and Christopher.

One of the GriddleS actor ("JGridletCreator" ) is missing from user 
interface. But I can see kar file in kar directory 
($KEPLER/kar/actors/JGridletCreator.kar)
but I couldn't see cache object corresponding to this actor in 
$HOME/.kepler/cache/objects directory. The entry corresponding to this 
actor in the file "$HOME/.kepler/actorLibrary is also missing.

Eventhough there is an entry in the 
$KEPLER/configs/ptolemy/configs/kepler/ontologies/keplerActorOntology.owl  
corresponding to "gridlets" folder which is subfolder of Griddles folder.

I am using this folder for storing dynamically created application actors.

My guess is that there may be duplication of identity.
The entry in the MANIFEST.MF is as follows ...
-------------------------
Manifest-Version: 1.4.2
KAR-Version: 1.0
lsid: urn:lsid:kepler-project.org:kar:166:1
         
Name: JGridletCreator.xml  
lsid: urn:lsid:kepler-project.org:actor:445:1
type: actorMetadata
---------------------------------------

Could you mind to tell me how to fix this problem?

with regards,

Jagan Kommineni



Dan Higgins wrote:

> jagan,
>     Empty directories cannot be removed from the CVS repository. The 
> trick is to checkout CVS including the '-P' flag (which stands for 
> 'Prune'). This will remove all empty directories from your local copy.
>
> Dan
>
> jagan wrote:
>
>> Hi Ilkay,
>>
>> Thanks for your message.
>>
>> I have updated my versions of ptII and Kepler with cvs  versions.
>>
>> There are some empty directories in cvs which causing to stop  
>> "buildkarlib"   task.
>> But after removing those directories I am able to compile and run 
>> kepler without any problem.
>> Is there any way we can remove these directries from cvs tree so that 
>> others won't get this problem?
>>
>> I am not sure whether these directories are required.
>>
>> Some of the Griddles stuff is missing:--- Here are the details ....
>> -------------------------------------
>>
>> I can't find one of the GriddlesActor "JGridletCreator" and a sub 
>> folder named "gridlets" under Griddles folder.
>>
>> I can see kar file created for JGridletCreator at 
>> $KEPLER/actors/JGridletCreator.jar and
>> also there is an entry for griddles in 
>> $KEPLER/configs/ptolemy/configs/kepler/ontologies/keplerActorOntology.owl 
>>
>>
>> -------------------------------------------------------------------------------------------------------- 
>>
>> Here is the error message while running "buildkarlib" task .......
>> --------------------------------------------------------------------------------------------------------- 
>>
>> [jagan at dione kepler]$ ant buildkarlib
>> Buildfile: build.xml
>>
>> clean-kar:
>>    [delete] Deleting directory /home/jagan/kepler/kar
>>
>> buildkarlib:
>>     [mkdir] Created dir: /home/jagan/kepler/kar/actors
>>     [mkdir] Created dir: /home/jagan/kepler/kar/griddles
>>
>> kar:
>>      [echo] Generating kar file: ADNToHTMLConversion
>>
>> BUILD FAILED
>> /home/jagan/kepler/build.xml:893: The following error occurred while 
>> executing this line:
>> /home/jagan/kepler/build.xml:913: Manifest file: 
>> /home/jagan/kepler/src/actors/ADNToHTMLConversion/MANIFEST.MF does 
>> not exist.
>>
>> Total time: 8 seconds
>> [jagan at dione kepler]$
>> --------------------------------------------------------------
>> Here are the list of empty directories need to be cleaned ..........
>> =======================================
>> /home/jagan/kepler/src/actors/ADNToHTMLConversion
>> /home/jagan/kepler/src/actors/ArrayElementOccurrences
>> /home/jagan/kepler/src/actors/ClustalW
>> /home/jagan/kepler/src/actors/ClustalWOutputAdapter
>> /home/jagan/kepler/src/actors/ClustalW_Local
>> /home/jagan/kepler/src/actors/ClustalW_Remote
>> /home/jagan/kepler/src/actors/Dart_MatlabExpression
>> /home/jagan/kepler/src/actors/Dart_MatlabExpression.xml
>> /home/jagan/kepler/src/actors/DelimitedParser
>> /home/jagan/kepler/src/actors/FileArrayPrinter
>> /home/jagan/kepler/src/actors/FileLocator
>> /home/jagan/kepler/src/actors/FilesystemCacheGet
>> /home/jagan/kepler/src/actors/FilesystemCachePut
>> /home/jagan/kepler/src/actors/FiringCountLimitPortRamp
>> /home/jagan/kepler/src/actors/InputsToXML
>> /home/jagan/kepler/src/actors/InteractiveExecution
>> /home/jagan/kepler/src/actors/KeplerImageReader
>> /home/jagan/kepler/src/actors/Logger
>> /home/jagan/kepler/src/actors/MoMLToRelationalConverter
>> /home/jagan/kepler/src/actors/NewSinewave
>> /home/jagan/kepler/src/actors/RBoxPlot
>> /home/jagan/kepler/src/actors/TextFileReader
>> /home/jagan/kepler/src/actors/Trainer
>> /home/jagan/kepler/src/actors/WebServiceHarvester
>> /home/jagan/kepler/src/actors/XMLGetAttributeValue
>> /home/jagan/kepler/src/actors/XMLToOutputsConverter
>> ================================================
>>
>> with regards,
>>
>> Jagan Kommineni
>>
>> _______________________________________________
>> Kepler-dev mailing list
>> Kepler-dev at ecoinformatics.org
>> http://mercury.nceas.ucsb.edu/ecoinformatics/mailman/listinfo/kepler-dev
>>
>>   
>
>
>



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