[kepler-dev] Kepler problems with Digir and GEON sources

Efrat Jaeger efrat at sdsc.edu
Wed Jul 26 16:20:05 PDT 2006


Thanks Dan, it's working now.
-Efrat

Dan Higgins wrote:
> Hi Efrat,
>    We have been tied up in meetings here the last 2 days, so sorry for 
> the delay in responding.
>
>    It looks to me like the GEON server simply isn't responding.  The 
> listed 'endpoint' for GEON (in thelib/config.xml file)  is:
>
> http://geon01.sdsc.edu:8407/GEONImpl/services/GeonQueryService
>
> I am unable to connect to that endpoint using a browser, but I can 
> (now) connect to the Digir and Metacat endpoints. I don't think 
> anything has changed in the Ecogrid search code (but Jing might know 
> better)
>
> Dan
>
> Efrat Jaeger wrote:
>>
>>> Hi Jing and everyone,
>>>
>>> Has anything changed with the Ecogrid search? The GEON data sources 
>>> search was last tested successfully at the SEEK site review and 
>>> there were no changes to them since then.
>>>
>>> Thanks,
>>> Efrat
>>>
>>> Jing Tao wrote:
>>>
>>>> Yeah, I got the same error as Dan.
>>>>
>>>> Jing
>>>>
>>>> Jing Tao
>>>> National Center for Ecological
>>>> Analysis and Synthesis (NCEAS)
>>>> 735 State St. Suite 204
>>>> Santa Barbara, CA 93101
>>>>
>>>> On Thu, 13 Jul 2006, Dan Higgins wrote:
>>>>
>>>>> Date: Thu, 13 Jul 2006 16:06:41 -0700
>>>>> From: Dan Higgins <higgins at nceas.ucsb.edu>
>>>>> To: Dave Vieglais <vieglais at ku.edu>, Efrat Frank <efrat at sdsc.edu>,
>>>>>     Jing Tao <tao at nceas.ucsb.edu>
>>>>> Cc: Matt Jones <jones at nceas.ucsb.edu>
>>>>> Subject: Kepler problems with Digir and GEON sources
>>>>>
>>>>> Hi All,
>>>>>   I just discovered that trying any search in Kepler with the 
>>>>> Digir or GEON sources turned on generates a series of error 
>>>>> messages (see below). However, there error do not appear if only 
>>>>> metacat is enabled. Are these ecogrid services working for you? 
>>>>> (It looks like both services are down to me.)
>>>>>
>>>>> Dan Higgins
>>>>>
>>>>>    [java] ERROR 
>>>>> (org.ecoinformatics.seek.datasource.EcogridQueryDataCacheItem:
>>>>> doWork:92) The exception in query is
>>>>>    [java] AxisFault
>>>>>    [java]  faultCode: 
>>>>> {http://schemas.xmlsoap.org/soap/envelope/}Server.userEx
>>>>> ception
>>>>>    [java]  faultSubcode:
>>>>>    [java]  faultString: java.net.SocketException: Software caused 
>>>>> connection a
>>>>> bort: recv failed
>>>>>    [java]  faultActor:
>>>>>    [java]  faultNode:
>>>>>    [java]  faultDetail:
>>>>>    [java] 
>>>>> {http://xml.apache.org/axis/}stackTrace:java.net.SocketException
>>>>> : Software caused connection abort: recv failed
>>>>>    [java]     at java.net.SocketInputStream.socketRead0(Native 
>>>>> Method)
>>>>>    [java]     at 
>>>>> java.net.SocketInputStream.read(SocketInputStream.java:129)
>>>>>    [java]     at 
>>>>> java.io.BufferedInputStream.fill(BufferedInputStream.java:183
>>>>> )
>>>>>    [java]     at 
>>>>> java.io.BufferedInputStream.read(BufferedInputStream.java:201
>>>>> )
>>>>>    [java]     at 
>>>>> org.apache.axis.transport.http.HTTPSender.readHeadersFromSock
>>>>> et(HTTPSender.java:583)
>>>>>    [java]     at 
>>>>> org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.j
>>>>> ava:143)
>>>>>    [java]     at 
>>>>> org.apache.axis.strategies.InvocationStrategy.visit(Invocatio
>>>>> nStrategy.java:32)
>>>>>    [java]     at 
>>>>> org.apache.axis.SimpleChain.doVisiting(SimpleChain.java:118)
>>>>>    [java]     at 
>>>>> org.apache.axis.SimpleChain.invoke(SimpleChain.java:83)
>>>>>    [java]     at 
>>>>> org.apache.axis.client.AxisClient.invoke(AxisClient.java:165)
>>>>>
>>>>>    [java]     at 
>>>>> org.apache.axis.client.Call.invokeEngine(Call.java:2784)
>>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:2767)
>>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:2443)
>>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:2366)
>>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:1812)
>>>>>    [java]     at 
>>>>> org.ecoinformatics.ecogrid.queryservice.stub.EcoGridQueryLeve
>>>>> lOneServiceStub.query(EcoGridQueryLevelOneServiceStub.java:266)
>>>>>    [java]     at 
>>>>> org.ecoinformatics.ecogrid.queryservice.EcogridQueryClient.qu
>>>>> ery(EcogridQueryClient.java:103)
>>>>>    [java]     at 
>>>>> org.ecoinformatics.seek.datasource.EcogridQueryDataCacheItem.
>>>>> doWork(EcogridQueryDataCacheItem.java:83)
>>>>>    [java]     at 
>>>>> org.kepler.objectmanager.cache.DataCacheObject.run(DataCacheO
>>>>> bject.java:455)
>>>>>    [java]     at java.lang.Thread.run(Thread.java:534)
>>>>>
>>>>>    [java]     {http://xml.apache.org/axis/}hostname:dhiggins
>>>>>
>>>>>    [java] java.net.SocketException: Software caused connection 
>>>>> abort: recv fai
>>>>> led
>>>>>    [java]     at 
>>>>> org.apache.axis.AxisFault.makeFault(AxisFault.java:101)
>>>>>    [java]     at 
>>>>> org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.j
>>>>> ava:154)
>>>>>    [java]     at 
>>>>> org.apache.axis.strategies.InvocationStrategy.visit(Invocatio
>>>>> nStrategy.java:32)
>>>>>    [java]     at 
>>>>> org.apache.axis.SimpleChain.doVisiting(SimpleChain.java:118)
>>>>>    [java]     at 
>>>>> org.apache.axis.SimpleChain.invoke(SimpleChain.java:83)
>>>>>    [java]     at 
>>>>> org.apache.axis.client.AxisClient.invoke(AxisClient.java:165)
>>>>>
>>>>>    [java]     at 
>>>>> org.apache.axis.client.Call.invokeEngine(Call.java:2784)
>>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:2767)
>>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:2443)
>>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:2366)
>>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:1812)
>>>>>    [java]     at 
>>>>> org.ecoinformatics.ecogrid.queryservice.stub.EcoGridQueryLeve
>>>>> lOneServiceStub.query(EcoGridQueryLevelOneServiceStub.java:266)
>>>>>    [java]     at 
>>>>> org.ecoinformatics.ecogrid.queryservice.EcogridQueryClient.qu
>>>>> ery(EcogridQueryClient.java:103)
>>>>>    [java]     at 
>>>>> org.ecoinformatics.seek.datasource.EcogridQueryDataCacheItem.
>>>>> doWork(EcogridQueryDataCacheItem.java:83)
>>>>>    [java]     at 
>>>>> org.kepler.objectmanager.cache.DataCacheObject.run(DataCacheO
>>>>> bject.java:455)
>>>>>    [java]     at java.lang.Thread.run(Thread.java:534)
>>>>>    [java] Caused by: java.net.SocketException: Software caused 
>>>>> connection abor
>>>>> t: recv failed
>>>>>    [java]     at java.net.SocketInputStream.socketRead0(Native 
>>>>> Method)
>>>>>    [java]     at 
>>>>> java.net.SocketInputStream.read(SocketInputStream.java:129)
>>>>>    [java]     at 
>>>>> java.io.BufferedInputStream.fill(BufferedInputStream.java:183
>>>>> )
>>>>>    [java]     at 
>>>>> java.io.BufferedInputStream.read(BufferedInputStream.java:201
>>>>> )
>>>>>    [java]     at 
>>>>> org.apache.axis.transport.http.HTTPSender.readHeadersFromSock
>>>>> et(HTTPSender.java:583)
>>>>>    [java]     at 
>>>>> org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.j
>>>>> ava:143)
>>>>>    [java]     ... 14 more
>>>>>
>>>>> -- 
>>>>> *******************************************************************
>>>>> Dan Higgins                                  higgins at nceas.ucsb.edu
>>>>> http://www.nceas.ucsb.edu/    Ph: 805-893-5127
>>>>> National Center for Ecological Analysis and Synthesis (NCEAS) 
>>>>> Marine Science Building - Room 3405
>>>>> Santa Barbara, CA 93195
>>>>> *******************************************************************
>>>>>
>>>>>
>>>>>
>>>
>>
>
>



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