[kepler-dev] Kepler problems with Digir and GEON sources

Dan Higgins higgins at nceas.ucsb.edu
Wed Jul 26 13:42:45 PDT 2006


Hi Efrat,
    We have been tied up in meetings here the last 2 days, so sorry for 
the delay in responding.

    It looks to me like the GEON server simply isn't responding.  The 
listed 'endpoint' for GEON (in thelib/config.xml file)  is:

http://geon01.sdsc.edu:8407/GEONImpl/services/GeonQueryService

I am unable to connect to that endpoint using a browser, but I can (now) 
connect to the Digir and Metacat endpoints. I don't think anything has 
changed in the Ecogrid search code (but Jing might know better)

Dan

Efrat Jaeger wrote:
>
>> Hi Jing and everyone,
>>
>> Has anything changed with the Ecogrid search? The GEON data sources 
>> search was last tested successfully at the SEEK site review and there 
>> were no changes to them since then.
>>
>> Thanks,
>> Efrat
>>
>> Jing Tao wrote:
>>
>>> Yeah, I got the same error as Dan.
>>>
>>> Jing
>>>
>>> Jing Tao
>>> National Center for Ecological
>>> Analysis and Synthesis (NCEAS)
>>> 735 State St. Suite 204
>>> Santa Barbara, CA 93101
>>>
>>> On Thu, 13 Jul 2006, Dan Higgins wrote:
>>>
>>>> Date: Thu, 13 Jul 2006 16:06:41 -0700
>>>> From: Dan Higgins <higgins at nceas.ucsb.edu>
>>>> To: Dave Vieglais <vieglais at ku.edu>, Efrat Frank <efrat at sdsc.edu>,
>>>>     Jing Tao <tao at nceas.ucsb.edu>
>>>> Cc: Matt Jones <jones at nceas.ucsb.edu>
>>>> Subject: Kepler problems with Digir and GEON sources
>>>>
>>>> Hi All,
>>>>   I just discovered that trying any search in Kepler with the Digir 
>>>> or GEON sources turned on generates a series of error messages (see 
>>>> below). However, there error do not appear if only metacat is 
>>>> enabled. Are these ecogrid services working for you? (It looks like 
>>>> both services are down to me.)
>>>>
>>>> Dan Higgins
>>>>
>>>>    [java] ERROR 
>>>> (org.ecoinformatics.seek.datasource.EcogridQueryDataCacheItem:
>>>> doWork:92) The exception in query is
>>>>    [java] AxisFault
>>>>    [java]  faultCode: 
>>>> {http://schemas.xmlsoap.org/soap/envelope/}Server.userEx
>>>> ception
>>>>    [java]  faultSubcode:
>>>>    [java]  faultString: java.net.SocketException: Software caused 
>>>> connection a
>>>> bort: recv failed
>>>>    [java]  faultActor:
>>>>    [java]  faultNode:
>>>>    [java]  faultDetail:
>>>>    [java] 
>>>> {http://xml.apache.org/axis/}stackTrace:java.net.SocketException
>>>> : Software caused connection abort: recv failed
>>>>    [java]     at java.net.SocketInputStream.socketRead0(Native Method)
>>>>    [java]     at 
>>>> java.net.SocketInputStream.read(SocketInputStream.java:129)
>>>>    [java]     at 
>>>> java.io.BufferedInputStream.fill(BufferedInputStream.java:183
>>>> )
>>>>    [java]     at 
>>>> java.io.BufferedInputStream.read(BufferedInputStream.java:201
>>>> )
>>>>    [java]     at 
>>>> org.apache.axis.transport.http.HTTPSender.readHeadersFromSock
>>>> et(HTTPSender.java:583)
>>>>    [java]     at 
>>>> org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.j
>>>> ava:143)
>>>>    [java]     at 
>>>> org.apache.axis.strategies.InvocationStrategy.visit(Invocatio
>>>> nStrategy.java:32)
>>>>    [java]     at 
>>>> org.apache.axis.SimpleChain.doVisiting(SimpleChain.java:118)
>>>>    [java]     at 
>>>> org.apache.axis.SimpleChain.invoke(SimpleChain.java:83)
>>>>    [java]     at 
>>>> org.apache.axis.client.AxisClient.invoke(AxisClient.java:165)
>>>>
>>>>    [java]     at 
>>>> org.apache.axis.client.Call.invokeEngine(Call.java:2784)
>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:2767)
>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:2443)
>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:2366)
>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:1812)
>>>>    [java]     at 
>>>> org.ecoinformatics.ecogrid.queryservice.stub.EcoGridQueryLeve
>>>> lOneServiceStub.query(EcoGridQueryLevelOneServiceStub.java:266)
>>>>    [java]     at 
>>>> org.ecoinformatics.ecogrid.queryservice.EcogridQueryClient.qu
>>>> ery(EcogridQueryClient.java:103)
>>>>    [java]     at 
>>>> org.ecoinformatics.seek.datasource.EcogridQueryDataCacheItem.
>>>> doWork(EcogridQueryDataCacheItem.java:83)
>>>>    [java]     at 
>>>> org.kepler.objectmanager.cache.DataCacheObject.run(DataCacheO
>>>> bject.java:455)
>>>>    [java]     at java.lang.Thread.run(Thread.java:534)
>>>>
>>>>    [java]     {http://xml.apache.org/axis/}hostname:dhiggins
>>>>
>>>>    [java] java.net.SocketException: Software caused connection 
>>>> abort: recv fai
>>>> led
>>>>    [java]     at 
>>>> org.apache.axis.AxisFault.makeFault(AxisFault.java:101)
>>>>    [java]     at 
>>>> org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.j
>>>> ava:154)
>>>>    [java]     at 
>>>> org.apache.axis.strategies.InvocationStrategy.visit(Invocatio
>>>> nStrategy.java:32)
>>>>    [java]     at 
>>>> org.apache.axis.SimpleChain.doVisiting(SimpleChain.java:118)
>>>>    [java]     at 
>>>> org.apache.axis.SimpleChain.invoke(SimpleChain.java:83)
>>>>    [java]     at 
>>>> org.apache.axis.client.AxisClient.invoke(AxisClient.java:165)
>>>>
>>>>    [java]     at 
>>>> org.apache.axis.client.Call.invokeEngine(Call.java:2784)
>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:2767)
>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:2443)
>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:2366)
>>>>    [java]     at org.apache.axis.client.Call.invoke(Call.java:1812)
>>>>    [java]     at 
>>>> org.ecoinformatics.ecogrid.queryservice.stub.EcoGridQueryLeve
>>>> lOneServiceStub.query(EcoGridQueryLevelOneServiceStub.java:266)
>>>>    [java]     at 
>>>> org.ecoinformatics.ecogrid.queryservice.EcogridQueryClient.qu
>>>> ery(EcogridQueryClient.java:103)
>>>>    [java]     at 
>>>> org.ecoinformatics.seek.datasource.EcogridQueryDataCacheItem.
>>>> doWork(EcogridQueryDataCacheItem.java:83)
>>>>    [java]     at 
>>>> org.kepler.objectmanager.cache.DataCacheObject.run(DataCacheO
>>>> bject.java:455)
>>>>    [java]     at java.lang.Thread.run(Thread.java:534)
>>>>    [java] Caused by: java.net.SocketException: Software caused 
>>>> connection abor
>>>> t: recv failed
>>>>    [java]     at java.net.SocketInputStream.socketRead0(Native Method)
>>>>    [java]     at 
>>>> java.net.SocketInputStream.read(SocketInputStream.java:129)
>>>>    [java]     at 
>>>> java.io.BufferedInputStream.fill(BufferedInputStream.java:183
>>>> )
>>>>    [java]     at 
>>>> java.io.BufferedInputStream.read(BufferedInputStream.java:201
>>>> )
>>>>    [java]     at 
>>>> org.apache.axis.transport.http.HTTPSender.readHeadersFromSock
>>>> et(HTTPSender.java:583)
>>>>    [java]     at 
>>>> org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.j
>>>> ava:143)
>>>>    [java]     ... 14 more
>>>>
>>>> -- 
>>>> *******************************************************************
>>>> Dan Higgins                                  higgins at nceas.ucsb.edu
>>>> http://www.nceas.ucsb.edu/    Ph: 805-893-5127
>>>> National Center for Ecological Analysis and Synthesis (NCEAS) 
>>>> Marine Science Building - Room 3405
>>>> Santa Barbara, CA 93195
>>>> *******************************************************************
>>>>
>>>>
>>>>
>>
>


-- 
*******************************************************************
Dan Higgins                                  higgins at nceas.ucsb.edu
http://www.nceas.ucsb.edu/    Ph: 805-893-5127
National Center for Ecological Analysis and Synthesis (NCEAS) Marine Science Building - Room 3405
Santa Barbara, CA 93195
*******************************************************************




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