[kepler-users] how to open a workflow from the command line

Derik Barseghian barseghian at nceas.ucsb.edu
Tue Nov 9 10:39:17 PST 2010


David,

The messages about workflow directories not existing are nothing to worry about, that's just a debugging statement. I'll track it down and remove it.

Derik

On Nov 9, 2010, at 10:33 AM, Matt Jones wrote:

> David -- 
> 
> When you are executing from a KAR file, you need to use the '-runkar' option, rather than the '-runwf' option.   Try:
> 
> $ /usr/local/Kepler-2.0/kepler.sh -runkar /home/dlebauer/pecan/kepler/pecan.kar
> 
> I'm not sure about the other errors about directories not existing -- someone else will hopefully comment on that.
> 
> Matt
> 
> On Tue, Nov 9, 2010 at 8:55 AM, David LeBauer <dlebauer at illinois.edu> wrote:
> Hello,
> 
> I would like to open a kar file from the command line (following
> manual ch 2 section 3):
> $ /usr/local/Kepler-2.0/kepler.sh -runwf /home/dlebauer/pecan/kepler/pecan.kar
> 
> but I am getting the following error (full output below):
>     [null] Unsupported file type or connection not available:
> file:/home/dlebauer/pecan/kepler/pecan.kar
> 
> Also, is it "okay" that so many directories for installed modules do not exist?
> 
> Thank you,
> 
> David
> 
> $ /usr/local/Kepler-2.0/kepler.sh -runwf /home/dlebauer/pecan/kepler/pecan.kar
>     [null] /usr/local/Kepler-2.0
>     [null] Checking for patches...
>     [null] reporting-2.1.0 workflow dir does not exist.
>     [null] workflow-run-manager-2.1.0 workflow dir does not exist.
>     [null] provenance-2.1.0 workflow dir already copied, no need to copy.
>     [null] tagging-2.1.0 workflow dir does not exist.
>     [null] kepler-2.1.0 workflow dir does not exist.
>     [null] outreach-2.1.0 workflow dir already copied, no need to copy.
>     [null] apple-extensions-2.0.0 workflow dir does not exist.
>     [null] r-2.1.0 workflow dir already copied, no need to copy.
>     [null] loader-2.0.0 workflow dir does not exist.
>     [null] actors-2.1.0 workflow dir already copied, no need to copy.
>     [null] directors-2.0.0 workflow dir does not exist.
>     [null] opendap-2.0.0 workflow dir does not exist.
>     [null] dataturbine-2.0.0 workflow dir does not exist.
>     [null] ecogrid-2.1.0 workflow dir does not exist.
>     [null] authentication-gui-2.0.0 workflow dir does not exist.
>     [null] module-manager-gui-2.1.0 workflow dir does not exist.
>     [null] gui-2.1.0 workflow dir does not exist.
>     [null] authentication-2.1.0 workflow dir does not exist.
>     [null] repository-2.1.0 workflow dir does not exist.
>     [null] job-2.0.0 workflow dir does not exist.
>     [null] io-2.0.0 workflow dir does not exist.
>     [null] ssh-2.0.0 workflow dir does not exist.
>     [null] data-handling-2.0.0 workflow dir does not exist.
>     [null] sms-2.1.0 workflow dir does not exist.
>     [null] component-library-2.0.0 workflow dir does not exist.
>     [null] util-2.0.0 workflow dir does not exist.
>     [null] event-state-2.0.0 workflow dir does not exist.
>     [null] core-2.1.0 workflow dir does not exist.
>     [null] common-2.1.0 workflow dir does not exist.
>     [null] module-manager-2.1.0 workflow dir does not exist.
>     [null] configuration-manager-2.1.0 workflow dir does not exist.
>     [null] kepler-tasks-2.1.0 workflow dir does not exist.
>     [null] ptolemy-8.0.0 workflow dir does not exist.
>     [null] Found OS Extension file:
> /usr/local/Kepler-2.0/apple-extensions-2.0.0/module-info/osextension.txt
>     [null] Ran additional initialization for module gui from class
> org.kepler.module.gui.Initialize
>     [null] Ran additional initialization for module tagging from
> class org.kepler.module.tagging.Initialize
>     [null] Ran additional initialization for module provenance from
> class org.kepler.module.provenance.Initialize
>     [null] common tabpane configuration overridden by WRM
>     [null] Ran additional initialization for module
> workflowrunmanager from class
> org.kepler.module.workflowrunmanager.Initialize
>     [null] common tabpane configuration overridden by reporting
>     [null] Ran additional initialization for module reporting from
> class org.kepler.module.reporting.Initialize
>     [null] Executing ptExecuteApplication
>     [null] Kepler Initializing...
>     [null] Unsupported file type or connection not available:
> file:/home/dlebauer/pecan/kepler/pecan.kar
>     [null] Done.
>     [null] Ctrl-c to exit.
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