[kepler-users] ERROR EXECUTING A .KAR FILE

[ben leinfelder]

My findings:
-ran successfully with a clean-cache
-second attempt to run (without cleaning the cache) failed due to an  
ObjectManager error relating to the semanticTypes.

I noticed there is a tag on the workflow which is likely the source of  
the problem. We should fix whatever issue is causing this error when  
the MOML is parsed:
Caused by: ptolemy.kernel.util.NameDuplicationException: Attempt to  
insert object named "semanticType" into a container that already  
contains an object with that name.
....the problems seem to begin around here:
at org.kepler.objectmanager.ActorMetadata.getActorAsNamedObj 
(ActorMetadata.java:790)

Aaron - can you take a look at this?

Thanks,
-ben

On Mar 8, 2010, at 2:06 PM, Josep Morer Muñoz wrote:

> Thanks for your help Chad. Attached the file.
>
> 2010/3/8 Chad Berkley <berkley at nceas.ucsb.edu>
> Hi Josep,
>
> Could you send me the kar file so I can take a look?  You can create  
> the kar from the workflow by opening the workflow in kepler, then  
> choosing File/Save Archive.
>
> I just tried the command:
> ./kepler.sh test.kar -runwf -nogui
> which worked for me with a kar that I generated the way I said  
> above.  I don't think the -nocache option will work with a kar file  
> because the kar needs to be cached to be processed.  Ben, do you  
> know if this is true?
>
> thanks,
> chad
>
>
> Josep Morer Muñoz wrote:
> Hi all,
>
> I am getting this error when I try to execute a .KAR that contains  
> the Regression Workflow (included in the examples) and another XML  
> that cointains the report's layout. When I execute it using  
> kepler.sh I get this following exception. Any idea? I do not know if  
> I have generated the .KAR correctly since I do not know what a  
> sematic type means in Kepler.
>
> urops at urops-laptop:~/KeplerLast$ ./kepler.sh /home/urops/ 
> workflowsProvenance/05-LinearRegressionProvenance.kar -runwf -nogui - 
> nocache
>     [null] /home/urops/KeplerLast
>     [null] Found OS Extension file: /home/urops/KeplerLast/apple- 
> extensions/module-info/osextension.txt
>     [null] Ran additional initialization for module gui from class  
> org.kepler.module.gui.Initialize
>     [null] Ran additional initialization for module tagging from  
> class org.kepler.module.tagging.Initialize
>     [null] Ran additional initialization for module provenance from  
> class org.kepler.module.provenance.Initialize
>     [null] common tabpane configuration overridden by reporting
>     [null] Ran additional initialization for module reporting from  
> class org.kepler.module.reporting.Initialize
>     [null] loading: ptolemy.moml.MoMLCommandLineApplication args: / 
> home/urops/workflowsProvenance/05-LinearRegressionProvenance.kar
>     [null] invoking: ptolemy.moml.MoMLCommandLineApplication.main
>     [null] Command failed: com.microstar.xml.XmlException: expected  
> character (found "P") (expected "<") in file:/home/urops/ 
> workflowsProvenance/05-LinearRegressionProvenance.kar at line 1 and  
> column 5
> *     [null] com.microstar.xml.XmlException: expected character  
> (found "P") (expected "<") in file:/home/urops/workflowsProvenance/ 
> 05-LinearRegressionProvenance.kar at line 1 and column 5*
>     [null]     at ptolemy.moml.MoMLParser.error(MoMLParser.java:1057)
>     [null]     at com.microstar.xml.XmlParser.error(XmlParser.java: 
> 448)
>     [null]     at com.microstar.xml.XmlParser.error(XmlParser.java: 
> 459)
>     [null]     at com.microstar.xml.XmlParser.require(XmlParser.java: 
> 2335)
>     [null]     at com.microstar.xml.XmlParser.parseDocument 
> (XmlParser.java:480)
>     [null]     at com.microstar.xml.XmlParser.doParse(XmlParser.java: 
> 159)
>     [null]     at com.microstar.xml.XmlParser.parse(XmlParser.java: 
> 132)
>     [null]     at ptolemy.moml.MoMLParser.parse(MoMLParser.java:1402)
>     [null]     at ptolemy.moml.MoMLParser.parse(MoMLParser.java:1354)
>     [null]     at ptolemy.moml.MoMLParser.parse(MoMLParser.java:1298)
>     [null]     at ptolemy.moml.MoMLCommandLineApplication.<init> 
> (MoMLCommandLineApplication.java:128)
>     [null]     at ptolemy.moml.MoMLCommandLineApplication.main 
> (MoMLCommandLineApplication.java:214)
>     [null]     at sun.reflect.NativeMethodAccessorImpl.invoke0 
> (Native Method)
>     [null]     at sun.reflect.NativeMethodAccessorImpl.invoke 
> (NativeMethodAccessorImpl.java:39)
>     [null]     at sun.reflect.DelegatingMethodAccessorImpl.invoke 
> (DelegatingMethodAccessorImpl.java:25)
>     [null]     at java.lang.reflect.Method.invoke(Method.java:592)
>     [null]     at org.kepler.Kepler.load(Kepler.java:321)
>     [null]     at org.kepler.Kepler.load(Kepler.java:339)
>     [null]     at org.kepler.Kepler.parseArgsAndRun(Kepler.java:267)
>     [null]     at org.kepler.Kepler.main(Kepler.java:169)
>
>
> Thanks in advance
> -- 
> Josep
>
>
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>
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>
>
> -- 
> Josep
> <05-LinearRegressionProvenance.kar>