[kepler-dev] New trunk version ! Compilation errors

Aaron Schultz aschultz at nceas.ucsb.edu
Wed Apr 8 13:32:30 PDT 2009 

OK, looks good now, let me know if there are any more problems.

Sorry I jumped the gun on that one.

Aaron


Aaron Schultz wrote:
>
> Working on it, the problem is that the OntologyCatalog is not getting 
> initialized properly after my change to loader->ProjectLocator 
> yesterday.  trying to figure out a fix now.
>
>
>
> Christopher Brooks wrote:
>> Hi David,
>> Yep, those files are safely back in their cage, gnawing the
>> leg of a unnamed staff person.
>>
>> A new tree works for me!
>>
>> You said:
>> > The error you are getting, I suspect, is because your cache is out of
>> > sync with your cache. It should go away when you do an ant 
>> clean-cache.
>> > I just started with a clean checkout and did not get this problem.
>>
>> I'm not sure about my cache being out of sync with my cache.
>>
>> ant clean-all runs ant clean-cache, and that did not fix it for me.
>>
>> Interesting, I did these steps:
>>
>> cd build-area
>> svn update
>> ant change-to -Dsuite=kepler-trunk
>> ant clean-all
>> ant update
>> ant run
>>
>> and my tree is still broken.
>>
>> I did a diff between my old tree (kepler.broken) and my new
>> tree (kepler) and there were some unchecked in changes in ptolemy,
>> which was fine, but there were these diffs that might be
>> of interest:
>>
>> Only in kepler.broken/build-area/ant-tasks/target: classes
>> diff -r -x .svn kepler.broken/build-area/modules.txt 
>> kepler/build-area/modules.txt
>> 0a1
>> > module-manager
>> 1a3
>> > gui
>> Only in kepler.broken/common: .classpath
>> Only in kepler.broken/common: .project
>> diff -r -x .svn 
>> kepler.broken/common/configs/ptolemy/configs/kepler/modules.properties 
>> kepler/common/configs/ptolemy/configs/kepler/modules.properties
>> 6c6
>> < modules=ptolemy-lib ptolemy common directors actors core util loader
>> \ No newline at end of file
>> ---
>> > modules=ptolemy-lib ptolemy common directors actors core util gui 
>> loader module-manager
>> \ No newline at end of file
>>
>>
>>
>> Only in kepler: gui
>> Only in kepler.broken: kepler-1.0
>> Only in kepler.broken: kepler-1.0-jar-tag
>> diff -r -x .svn kepler.broken/kepler-trunk/module-info/modules.txt 
>> kepler/kepler-trunk/module-info/modules.txt
>> 0a1
>> > module-manager
>> 1a3
>> > gui
>>
>> Only in kepler.broken: vanilla-trunk
>>
>>
>> So, I'm not sure what's up, but it seems like I was able to get
>> my kepler tree into a state where it cannot be built.
>>
>> I'm not that concerned, but if you are curious, I've included a diff
>> between the broken tree and the fresh working tree.  I suspect that
>> something about adding gui and module-manager changed something.
>>
>> _Christopher
>>
>> David Welker wrote:
>>> Hi Everyone,
>>>
>>> Thanks Christopher for rounding up those "lab files" and caging them 
>>> safely away where they can be safely experimented on.
>>>
>>> The error you are getting, I suspect, is because your cache is out 
>>> of sync with your cache. It should go away when you do an ant 
>>> clean-cache. I just started with a clean checkout and did not get 
>>> this problem.
>>>
>>> I did, however, get the following problem: After running ant 
>>> clean-cache followed by ant run, I get the following strange output:
>>>
>>> [run] Building Kars...
>>> [run] Opening user preferences PtolemyPreferences.xml...
>>> [run] ERROR: in LibraryIndex at _buildNewIndex. Cannot find library 
>>> ontology
>>> [run] *** Attempting to get ResourceBundle for SVG defaults ***
>>> [run] *** svgRenderingMethod = SVG_BATIK_RENDERING ***
>>>
>>> There are also no actors populated in the ontology. The second time 
>>> I enter in ant run, the strange ERROR line goes away. However, still 
>>> there are no actors available.
>>>
>>> It appears that a recent change within the trunk (besides 
>>> Christopher's releasing of vicious lab files) have broken the 
>>> functionality of Kepler at the trunk. I hope that whoever is 
>>> responsible for recent changes that caused this problem fixes it as 
>>> soon as possible.
>>>
>>> This does, however, bring up larger issues with how we are dealing 
>>> with modules that are within kepler-trunk. My view is that you 
>>> should only commit changes if you are fairly sure that you are not 
>>> going to break anything. One thing to keep in mind if you are 
>>> working at modules at kepler-trunk is that sometimes problems like 
>>> this do not appear on your local machine, because actors might be 
>>> loaded from the .kepler cache. So, before you commit, make sure you 
>>> do an "ant clean-cache" and ensure that your changes do not break 
>>> anything. If in doubt, don't commit. Chances are, disruptions (which 
>>> affect quite a few people) from committing code that is not ready 
>>> for prime time outweigh the benefits of immediately being able to 
>>> use whatever feature you happen to be working on. I myself have been 
>>> burned a few times in this respect with the build system. I have 
>>> committed new code which I have not tested thoroughly enough. (Or, 
>>> most commonly, I forgot to do an svn add on a file that is critical 
>>> for things to work. Use svn status to see what files you still may 
>>> need to add before committing.) And the result is that my build 
>>> system no longer works the way it is supposed to.
>>>
>>> On the whole, of course, we are not going to have to make changes to 
>>> kepler-trunk and to the build system. But, I think we should be a 
>>> little more cautious when committing those changes, unless you are 
>>> sure that there will not be a negative impact on others.
>>>
>>> In general, I think most new development should occur in modules 
>>> outside of kepler-trunk. But, this is probably a topic of discussion 
>>> best left for our engineering meetings.
>>>
>>> David
>>>
>>>> Sorry about that, my bad.
>>>> Basically, I ran the wrong script, "fixfiles", instead of "fix-files",
>>>> so the files got out of the lab and ran amuck!
>>>>
>>>> However, now, after running
>>>> ant full-clean
>>>> ant change-to -Dsuite=kepler-trunk
>>>> ant run,
>>>>
>>>> I get
>>>>
>>>>    [run] java.lang.Exception: Failed to parse "-kepler"
>>>>       [run]     at 
>>>> ptolemy.actor.gui.MoMLApplication.throwArgsException(MoMLApplication.java:603) 
>>>>
>>>>       [run]     at 
>>>> ptolemy.actor.gui.MoMLApplication.<init>(MoMLApplication.java:264)
>>>>       [run]     at 
>>>> ptolemy.vergil.VergilApplication.<init>(VergilApplication.java:103)
>>>>       [run]     at 
>>>> ptolemy.vergil.VergilApplication$1.run(VergilApplication.java:193)
>>>>       [run]     at 
>>>> java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
>>>>       [run]     at 
>>>> java.awt.EventQueue.dispatchEvent(EventQueue.java:461)
>>>>       [run]     at 
>>>> java.awt.EventDispatchThread.pumpOneEventForHierarchy(EventDispatchThread.java:269) 
>>>>
>>>>       [run]     at 
>>>> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:190) 
>>>>
>>>>       [run]     at 
>>>> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:184)
>>>>       [run]     at 
>>>> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:176)
>>>>       [run]     at 
>>>> java.awt.EventDispatchThread.run(EventDispatchThread.java:110)
>>>>       [run] Caused by: java.lang.Exception: Failed to read 
>>>> configuration 
>>>> 'file:/Users/cxh/src/kepler/common/configs/ptolemy/configs/kepler/configuration.xml' 
>>>>
>>>>       [run]     at 
>>>> ptolemy.vergil.VergilApplication._createDefaultConfiguration(VergilApplication.java:285) 
>>>>
>>>>       [run]     at 
>>>> ptolemy.vergil.VergilApplication._createEmptyConfiguration(VergilApplication.java:321) 
>>>>
>>>>       [run]     at 
>>>> ptolemy.actor.gui.MoMLApplication._parseArgs(MoMLApplication.java:1045) 
>>>>
>>>>       [run]     at 
>>>> ptolemy.vergil.VergilApplication._parseArgs(VergilApplication.java:448) 
>>>>
>>>>       [run]     at 
>>>> ptolemy.actor.gui.MoMLApplication.<init>(MoMLApplication.java:217)
>>>>       [run]     ... 9 more
>>>>       [run] Caused by: com.microstar.xml.XmlException: XML element 
>>>> "property" triggers exception. in 
>>>> file:/Users/cxh/src/kepler/common/configs/ptolemy/configs/kepler/graphTableauFactory.xml 
>>>> at line 10 and column 66
>>>>       [run] Caused by:
>>>>       [run]  java.lang.ClassNotFoundException: 
>>>> org.kepler.gui.frame.KeplerGraphTableau$Factory
>>>>       [run]     at 
>>>> ptolemy.moml.MoMLParser.startElement(MoMLParser.java:3405)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.parseElement(XmlParser.java:931)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.parseContent(XmlParser.java:1104)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.parseElement(XmlParser.java:924)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.parseDocument(XmlParser.java:481)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.doParse(XmlParser.java:159)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.parse(XmlParser.java:132)
>>>>       [run]     at ptolemy.moml.MoMLParser.parse(MoMLParser.java:1410)
>>>>       [run]     at ptolemy.moml.MoMLParser.parse(MoMLParser.java:1367)
>>>>       [run]     at ptolemy.moml.MoMLParser.parse(MoMLParser.java:1329)
>>>>       [run]     at 
>>>> ptolemy.moml.MoMLParser._parse(MoMLParser.java:5772)
>>>>       [run]     at 
>>>> ptolemy.moml.MoMLParser.startElement(MoMLParser.java:2653)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.parseElement(XmlParser.java:931)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.parseContent(XmlParser.java:1104)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.parseElement(XmlParser.java:924)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.parseContent(XmlParser.java:1104)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.parseElement(XmlParser.java:924)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.parseDocument(XmlParser.java:481)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.doParse(XmlParser.java:159)
>>>>       [run]     at 
>>>> com.microstar.xml.XmlParser.parse(XmlParser.java:132)
>>>>       [run]     at ptolemy.moml.MoMLParser.parse(MoMLParser.java:1410)
>>>>       [run]     at ptolemy.moml.MoMLParser.parse(MoMLParser.java:1347)
>>>>       [run]     at ptolemy.moml.MoMLParser.parse(MoMLParser.java:1298)
>>>>       [run]     at 
>>>> ptolemy.actor.gui.MoMLApplication.readConfiguration(MoMLApplication.java:380) 
>>>>
>>>>       [run]     at 
>>>> ptolemy.vergil.VergilApplication._createDefaultConfiguration(VergilApplication.java:283) 
>>>>
>>>>       [run]     ... 13 more
>>>>       [run] Caused by: java.lang.ClassNotFoundException: 
>>>> org.kepler.gui.frame.KeplerGraphTableau$Factory
>>>>       [run]     at 
>>>> java.net.URLClassLoader$1.run(URLClassLoader.java:200)
>>>>       [run]     at 
>>>> java.security.AccessController.doPrivileged(Native Method)
>>>>       [run]     at 
>>>> java.net.URLClassLoader.findClass(URLClassLoader.java:188)
>>>>       [run]     at 
>>>> java.lang.ClassLoader.loadClass(ClassLoader.java:316)
>>>>       [run]     at 
>>>> sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:280)
>>>>       [run]     at 
>>>> java.lang.ClassLoader.loadClass(ClassLoader.java:251)
>>>>       [run]     at 
>>>> java.lang.ClassLoader.loadClassInternal(ClassLoader.java:374)
>>>>       [run]     at java.lang.Class.forName0(Native Method)
>>>>       [run]     at java.lang.Class.forName(Class.java:242)
>>>>       [run]     at 
>>>> ptolemy.moml.MoMLParser._handlePropertyElement(MoMLParser.java:5275)
>>>>       [run]     at 
>>>> ptolemy.moml.MoMLParser.startElement(MoMLParser.java:2866)
>>>>       [run]     ... 37 more
>>>> `
>>>>
>>>> tkd wrote:
>>>>> Hi,
>>>>>
>>>>> you juste changed the trunk version and it gives some errors on 
>>>>> compilation with ant run :
>>>>>
>>>>> ant run
>>>>> Buildfile: build.xml
>>>>>
>>>>> create-modules-bundle:
>>>>>
>>>>> compile:
>>>>> [compile] Compiling common...
>>>>> [compile] Compiling directors...
>>>>> [compile] Compiling actors...
>>>>> [compile] Compiling ptolemy...
>>>>> [compile]  -- The module is ptolemy. Setting includes and 
>>>>> excludes....
>>>>> [compile] Compiling 3134 source files to 
>>>>> /local/odrousse/eclipse/BioWIC/kepler/modules/ptolemy/target/classes
>>>>> [compile] 
>>>>> /local/odrousse/eclipse/BioWIC/kepler/modules/ptolemy/ptolemy/domains/modal/demo/ABP/DEMessageSource.java:57: 
>>>>> duplicate class: ptolemy.domains.fsm.demo.ABP.DEMessageSource
>>>>> [compile] public class DEMessageSource extends RandomSource {
>>>>> [compile]        ^
>>>>> [compile] 
>>>>> /local/odrousse/eclipse/BioWIC/kepler/modules/ptolemy/ptolemy/domains/modal/demo/ABP/DETimer.java:52: 
>>>>> duplicate class: ptolemy.domains.fsm.demo.ABP.DETimer
>>>>> [compile] public class DETimer extends TypedAtomicActor {
>>>>> [compile]        ^
>>>>> [compile] 
>>>>> /local/odrousse/eclipse/BioWIC/kepler/modules/ptolemy/ptolemy/domains/modal/kernel/FSMDirector.java:160: 
>>>>> duplicate class: ptolemy.domains.fsm.kernel.FSMDirector
>>>>> [compile] public class FSMDirector extends Director implements
>>>>> [compile]        ^
>>>>> [compile] 
>>>>> /local/odrousse/eclipse/BioWIC/kepler/modules/ptolemy/ptolemy/domains/modal/kernel/Transition.java:741: 
>>>>> cannot access ptolemy.domains.modal.kernel.FSMDirector
>>>>> [compile] bad class file: 
>>>>> /local/odrousse/eclipse/BioWIC/kepler/modules/ptolemy/ptolemy/domains/modal/kernel/FSMDirector.java 
>>>>>
>>>>> [compile] file does not contain class 
>>>>> ptolemy.domains.modal.kernel.FSMDirector
>>>>> [compile] Please remove or make sure it appears in the correct 
>>>>> subdirectory of the classpath.
>>>>> [compile]     private FSMDirector _getDirector() {
>>>>> [compile]             ^
>>>>> [compile] Note: 
>>>>> /local/odrousse/eclipse/BioWIC/kepler/modules/ptolemy/ptolemy/actor/gui/MoMLSimpleStatisticalApplication.java 
>>>>> uses or overrides a deprecated API.
>>>>> [compile] Note: Recompile with -Xlint:deprecation for details.
>>>>> [compile] 4 errors
>>>>>
>>>>> BUILD FAILED
>>>>> /local/odrousse/eclipse/BioWIC/kepler/modules/build-area/build.xml:31: 
>>>>> Compile failed; see the compiler error output for details.
>>>>>
>>>>> 2 days ago, it worked very well and now ... awful !
>>>>> Thanks a lot to say me what to do to get something works ...
>>>>>
>>>>> tkd ... desperated
>>>>> _______________________________________________
>>>>> Kepler-dev mailing list
>>>>> Kepler-dev at kepler-project.org
>>>>> http://mercury.nceas.ucsb.edu/kepler/mailman/listinfo/kepler-dev
>>>>
>>>
>>
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>>
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