[kepler-dev] [Bug 3226] New: - Eval: subplots from RExpression overly condensed
bugzilla-daemon at ecoinformatics.org
bugzilla-daemon at ecoinformatics.org
Wed Apr 16 15:42:19 PDT 2008
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=3226
Summary: Eval: subplots from RExpression overly condensed
Product: Kepler
Version: 1.0.0beta3
Platform: Other
OS/Version: All
Status: NEW
Keywords: evaluate, kruger
Severity: normal
Priority: P2
Component: general
AssignedTo: berkley at nceas.ucsb.edu
ReportedBy: drury at nceas.ucsb.edu
QAContact: kepler-dev at ecoinformatics.org
Using nightly build 14 Apr 08 under WinXP. The code below generates a
publication-quality graphic when run from the R command line. When run in an
RExpression actor, however the results are pretty unattractive.
Case 1: With an imageJ actor connected, the resulting RExpressionNUM.png is
extremely compressed. i.e., there is lots of white space and the subplots are
cramped.
Case 2: With no imageJ actor, and the "Automatically display graphics" button
checked, the resulting pdf is less cramped than the png, but still not as
well-proportioned as that coming directly from R.
Note: resizing the graphic does not help - proportions remain the same
# test code for RExpression actor subplot generation
# get data and variables in order...
library(MASS) ;
names(wtloss) ; attach(wtloss) ;
w<-Weight ; d<-Days ;
# set up stacked subplotting environment, plot top fig
par(mfrow=c(2,1)) ; plot(w~d) ;
res<-lm(w~d) ; abline(res) ;
# plot bottom fig
r<-residuals(res) ; plot(d,r) ;
# return to default graphics, clean up
par(mfrow=c(1,1)) ;
detach(wtloss) ;
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