[kepler-dev] kepler build issues with jar files

[Matt Jones]

Dan,

I seem to be having trouble running kepler from ant, especially if I do 
a clean build (see stack trace below).  It seems to be related to the 
fact that we have multiple, different versions of the log4j jar files, 
and now that your new classpath is in place the order fo jar imports 
seems broken.  Thi sis probably fixed by eliminating the offending 
versions of log4j that we don't need.   There are other duplicates as 
well that need to be reviewed carefully (e.g., axis.jar).  Is anyone 
else seeing these runtime problems?

Matt

Here's the error I get:
     [java] Opening user library 
/home/jones/.ptolemyII/UserLibrary.xml... Done
     [java] java.lang.VerifyError: (class: org/apache/log4j/Category, 
method: getRoot signature: ()Lorg/apache/log4j/Category;) Wrong return 
type in function
     [java]     at 
org.apache.commons.logging.impl.Log4jFactory.getInstance(Log4jFactory.java:140)
     [java]     at 
org.apache.commons.logging.impl.LogFactoryImpl.getInstance(LogFactoryImpl.java:257)
     [java]     at 
org.apache.commons.logging.LogFactory.getLog(LogFactory.java:390)
     [java]     at 
com.hp.hpl.jena.rdf.model.impl.PropertyImpl.<clinit>(PropertyImpl.java:58)
     [java]     at 
com.hp.hpl.jena.enhanced.BuiltinPersonalities.<clinit>(BuiltinPersonalities.java:28)
     [java]     at 
com.hp.hpl.jena.rdf.model.impl.ModelCom.<init>(ModelCom.java:50)
     [java]     at 
com.hp.hpl.jena.rdf.model.ModelFactory.createDefaultModel(ModelFactory.java:119)
     [java]     at 
com.hp.hpl.jena.rdf.model.ModelFactory.createDefaultModel(ModelFactory.java:113)
     [java]     at com.hp.hpl.jena.vocabulary.OWL.<clinit>(OWL.java:37)
     [java]     at 
com.hp.hpl.jena.ontology.ProfileRegistry.<clinit>(ProfileRegistry.java:48)
     [java]     at 
com.hp.hpl.jena.ontology.OntModelSpec.<clinit>(OntModelSpec.java:55)
     [java]     at 
org.ecoinformatics.seek.sms.AnnotationEngine.initialize(AnnotationEngine.java:133)
     [java]     at 
org.ecoinformatics.seek.sms.AnnotationEngine.<init>(AnnotationEngine.java:100)
     [java]     at 
org.ecoinformatics.seek.sms.AnnotationEngine.instance(AnnotationEngine.java:110)
     [java]     at 
org.ecoinformatics.seek.ecogrid.TabbedLibraryPane.<init>(TabbedLibraryPane.java:107)
     [java]     at 
org.ecoinformatics.seek.ecogrid.TabbedLibraryPane$Factory.createLibraryPane(TabbedLibraryPane.java:243)
     [java]     at 
org.ecoinformatics.seek.ecogrid.LibraryPaneFactory.createLibraryPane(LibraryPaneFactory.java:119)
     [java]     at 
ptolemy.vergil.basic.BasicGraphFrame.<init>(BasicGraphFrame.java:352)
     [java]     at 
ptolemy.vergil.basic.ExtendedGraphFrame.<init>(ExtendedGraphFrame.java:100)
     [java]     at 
ptolemy.vergil.actor.ActorGraphFrame.<init>(ActorGraphFrame.java:124)
     [java]     at 
ptolemy.vergil.actor.ActorGraphTableau.<init>(ActorGraphTableau.java:105)
     [java]     at 
ptolemy.vergil.actor.ActorGraphTableau$Factory.createTableau(ActorGraphTableau.java:162)
     [java]     at 
ptolemy.actor.gui.PtolemyTableauFactory.createTableau(PtolemyTableauFactory.java:98)
     [java]     at 
ptolemy.actor.gui.TableauFactory.createTableau(TableauFactory.java:122)
     [java]     at 
ptolemy.actor.gui.Configuration.createPrimaryTableau(Configuration.java:193)
     [java]     at 
ptolemy.actor.gui.TableauFrame$1.actionPerformed(TableauFrame.java:349)
     [java]     at 
javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1786)
     [java]     at 
javax.swing.AbstractButton$ForwardActionEvents.actionPerformed(AbstractButton.java:1839)
     [java]     at 
javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:420)
     [java]     at 
javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:258)
     [java]     at 
javax.swing.AbstractButton.doClick(AbstractButton.java:289)
     [java]     at 
javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1113)
     [java]     at 
javax.swing.plaf.basic.BasicMenuItemUI$MouseInputHandler.mouseReleased(BasicMenuItemUI.java:943)
     [java]     at java.awt.Component.processMouseEvent(Component.java:5100)
     [java]     at java.awt.Component.processEvent(Component.java:4897)
     [java]     at java.awt.Container.processEvent(Container.java:1569)
     [java]     at java.awt.Component.dispatchEventImpl(Component.java:3615)
     [java]     at java.awt.Container.dispatchEventImpl(Container.java:1627)
     [java]     at java.awt.Component.dispatchEvent(Component.java:3477)
     [java]     at 
java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:3483)
     [java]     at 
java.awt.LightweightDispatcher.processMouseEvent(Container.java:3198)
     [java]     at 
java.awt.LightweightDispatcher.dispatchEvent(Container.java:3128)
     [java]     at java.awt.Container.dispatchEventImpl(Container.java:1613)
     [java]     at java.awt.Window.dispatchEventImpl(Window.java:1606)
     [java]     at java.awt.Component.dispatchEvent(Component.java:3477)
     [java]     at java.awt.EventQueue.dispatchEvent(EventQueue.java:456)
     [java]     at 
java.awt.EventDispatchThread.pumpOneEventForHierarchy(EventDispatchThread.java:201)
     [java]     at 
java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:151)
     [java]     at 
java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:145)
     [java]     at 
java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:137)
     [java]     at 
java.awt.EventDispatchThread.run(EventDispatchThread.java:100)
     [java] ANNOTATION ENGINE: loading ontologies and annotations ...