[seek-dev] Help with installing GT3 for EcoGrid

Jing Tao tao at nceas.ucsb.edu
Thu Feb 5 09:09:19 PST 2004


Hi, Saritha:

I am sorry I didn't read Matt's email before sending my previous email. I 
agree with matt - using jdk1.4.2.

Jing

On Wed, 4 Feb 2004, Matt Jones wrote:

> Hi Saritha,
> 
> It looks to me like your having trouble because of your JDK version.  If 
> I remember correctly, jdk 1.3.x doesn't come with JASS, and that's 
> causing your failure.  The globus build instructions say to be sure you 
> are using jdk1.4.x or have installed the separate JAAS library if you're 
> using jdk1.3.  I'd recommend using the most recent jdk1.4.2 release if 
> possible.
> 
> Hope this fixes it for you.
> 
> Matt
> 
> Saritha Bhandarkar wrote:
> 
> > Hi,
> > 
> >  
> > 
> > My name is Saritha Bhandarkar and I work for Peter McCartney at Center 
> > for Environmental Studies, ASU. Currently, I am trying to install gt3 on 
> > Linux as the EcoGrid service container. I have downloaded the 
> > installation help document from the SEEK-CVS repository. I am new to 
> > Linux and would appreciate any help with this installation.
> > 
> >  
> > 
> > Thanks in advance,
> > 
> > Regards,
> > 
> > Saritha
> > 
> >  
> > 
> > -----------------------------------
> > 
> >  
> > 
> > First I installed the required tools (Java, Ant, gcc etc). Then I 
> > downloaded the gt3 Linux installation package from the globus.org 
> > website and unzipped it. When I run the ./install-gt3 command, it fails. 
> > First part of install.log is pasted below.
> > 
> >  
> > 
> >  
> > 
> > Build environment:
> > 
> > ant is hashed (/usr/local/devtools/ant/bin/ant)
> > 
> > java is /usr/local/devtools/jdk1.3.1_10/bin/java
> > 
> > gcc is /usr/bin/gcc
> > 
> >  
> > 
> > Building GPT ...
> > 
> > build_gpt ====> installing GPT into /usr/local/devtools/gt3
> > 
> > build_gpt ====> building support/Compress-Zlib-1.16
> > 
> > build_gpt ====> building support/Archive-Tar-0.22
> > 
> > build_gpt ====> building support/PodParser-1.18
> > 
> > build_gpt ====> building support/Digest-MD5-2.20
> > 
> > build_gpt ====> building packaging_tools
> > 
> > gpt-build ====> Changing to 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/globus_core-2.15/
> > 
> > gpt-build ====> BUILDING FLAVOR gcc32dbg
> > 
> > gpt-build ====> Changing to /usr/local/devtools/gt3/etc
> > 
> > gpt-build ====> REMOVING empty package globus_core-gcc32dbg-pgm_static
> > 
> > WARNING: "/usr/local/devtools/gt3//" not found
> > 
> > gpt-build ====> REMOVING empty package globus_core-noflavor-doc
> > 
> > gpt-build ====> CHECKING BUILD DEPENDENCIES FOR globus_core
> > 
> > SKIPPING REBUILD of gcc32dbg
> > 
> > WARNING: "/usr/local/devtools/gt3//" not found
> > 
> > gpt-build ====> CHECKING BUILD DEPENDENCIES FOR core
> > 
> > gpt-build ====> Changing to 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/
> > 
> > gpt-build ====> BUILDING FLAVOR
> > 
> >  ant -f impl/java/build.xml dist
> > 
> > Buildfile: impl/java/build.xml
> > 
> >  
> > 
> > setenv:
> > 
> >     [mkdir] Created dir: 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/build/classes
> > 
> >     [mkdir] Created dir: 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/build/lib
> > 
> >     [mkdir] Created dir: 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/schema
> > 
> >      [copy] Copying 67 files to 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/schema
> > 
> >      [copy] Copying 1 file to 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/schema
> > 
> >      [copy] Copying 1 file to 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java
> > 
> >      [copy] Copying 1 file to 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java
> > 
> >      [copy] Copying 1 file to 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java
> > 
> >      [copy] Copying 1 file to 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java
> > 
> >     [mkdir] Created dir: 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/src/org/gridforum
> > 
> >      [echo]  Build environment for OGSA
> > 
> >      [echo]  Flags (Note: If the {property name} is displayed,
> > 
> >      [echo]            then the component is not present)
> > 
> >  
> > 
> >      [echo]  Property values
> > 
> >      [echo] debug=true
> > 
> >      [echo] deprecation=true
> > 
> >  
> > 
> > tools:
> > 
> >     [javac] Compiling 48 source files to 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/build/classes
> > 
> >  
> > 
> > generateSchema:
> > 
> >  
> > 
> > WSDLUptodate:
> > 
> >  
> > 
> > GWSDL2WSDL:
> > 
> >      [echo] Generating wsdl for ogsi.gwsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > BindingUptodate:
> > 
> >  
> > 
> > generateBinding:
> > 
> >      [echo] Generating schema for ogsi
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > WSDLUptodate:
> > 
> >  
> > 
> > GWSDL2WSDL:
> > 
> >      [echo] Generating wsdl for ogsi_notification_factory.gwsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > BindingUptodate:
> > 
> >  
> > 
> > generateBinding:
> > 
> >      [echo] Generating schema for ogsi_notification_factory
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > WSDLUptodate:
> > 
> >  
> > 
> > GWSDL2WSDL:
> > 
> >      [echo] Generating wsdl for ogsi_factory.gwsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > BindingUptodate:
> > 
> >  
> > 
> > generateBinding:
> > 
> >      [echo] Generating schema for ogsi_factory
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > WSDLUptodate:
> > 
> >  
> > 
> > GWSDL2WSDL:
> > 
> >      [echo] Generating wsdl for ogsi_service_group_registration.gwsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > BindingUptodate:
> > 
> >  
> > 
> > generateBinding:
> > 
> >      [echo] Generating schema for ogsi_service_group_registration
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > WSDLUptodate:
> > 
> >  
> > 
> > GWSDL2WSDL:
> > 
> >      [echo] Generating wsdl for ogsi_notification_service_group.gwsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > BindingUptodate:
> > 
> >  
> > 
> > generateBinding:
> > 
> >      [echo] Generating schema for ogsi_notification_service_group
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > WSDLUptodate:
> > 
> >  
> > 
> > GWSDL2WSDL:
> > 
> >      [echo] Generating wsdl for management_port_type.gwsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > BindingUptodate:
> > 
> >  
> > 
> > generateBinding:
> > 
> >      [echo] Generating schema for management
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > WSDLUptodate:
> > 
> >  
> > 
> > GWSDL2WSDL:
> > 
> >      [echo] Generating wsdl for admin_port_type.gwsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > BindingUptodate:
> > 
> >  
> > 
> > generateBinding:
> > 
> >      [echo] Generating schema for admin
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > WSDLUptodate:
> > 
> >  
> > 
> > GWSDL2WSDL:
> > 
> >      [echo] Generating wsdl for logging_port_type.gwsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > BindingUptodate:
> > 
> >  
> > 
> > generateBinding:
> > 
> >      [echo] Generating schema for logging
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > WSDLUptodate:
> > 
> >  
> > 
> > GWSDL2WSDL:
> > 
> >      [echo] Generating wsdl for jms_adapter_port_type.gwsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > BindingUptodate:
> > 
> >  
> > 
> > generateBinding:
> > 
> >      [echo] Generating schema for jms_adapter
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > WSDLUptodate:
> > 
> >  
> > 
> > GWSDL2WSDL:
> > 
> >      [echo] Generating wsdl for gss_secure_conversation_port_type.gwsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > BindingUptodate:
> > 
> >  
> > 
> > generateBinding:
> > 
> >      [echo] Generating schema for gss_secure_conversation
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > stubs:
> > 
> >  
> > 
> > generateStubs:
> > 
> >      [echo]  Generating stubs from  ./schema/ogsi/ogsi_service.wsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > generateStubs:
> > 
> >      [echo]  Generating stubs from  ./schema/ogsi/ogsi_service_data.wsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > generateStubs:
> > 
> >      [echo]  Generating stubs from  ./schema/ogsi/gwsdl_port_type.wsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > generateStubsNS:
> > 
> >      [echo]  Generating stubs from  ./schema/core/types/timestamp.wsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > generateStubs:
> > 
> >      [echo]  Generating stubs from  
> > ./schema/core/types/properties_detail.wsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > generateStubs:
> > 
> >      [echo]  Generating stubs from  ./schema/core/types/query.wsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > generateStubs:
> > 
> >      [echo]  Generating stubs from  ./schema/core/types/subscription.wsdl
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > generateStubs:
> > 
> >      [echo]  Generating stubs from  ./schema/core/types/servicedata.wsdl
> > 
> >  
> > 
> >  
> > 
> >     [javac] Compiling 96 source files to 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/build/classes
> > 
> >     [javac] 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/src/org/globus/ogsa/impl/security/authorization/NoAuthorization.java:12: 
> > cannot resolve symbol
> > 
> >     [javac] symbol  : class Subject 
> > 
> >     [javac] location: package auth
> > 
> >     [javac] import javax.security.auth.Subject;
> > 
> >     [javac]                            ^
> > 
> >     [javac] 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/src/org/globus/ogsa/impl/security/authorization/Authorization.java:7: 
> > cannot resolve symbol
> > 
> >     [javac] symbol  : class Subject 
> > 
> >     [javac] location: package auth
> > 
> >     [javac] import javax.security.auth.Subject;
> > 
> >     [javac]                            ^
> > 
> >     [javac] 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/src/org/globus/ogsa/impl/security/authorization/ServiceAuthorization.java:9: 
> > cannot resolve symbol
> > 
> >     [javac] symbol  : class Subject 
> > 
> >     [javac] location: package auth
> > 
> >     [javac] import javax.security.auth.Subject;
> > 
> >     [javac]                            ^
> > 
> >     [javac] 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/src/org/globus/ogsa/impl/security/authorization/NoAuthorization.java:32: 
> > cannot resolve symbol
> > 
> >     [javac] symbol  : class Subject 
> > 
> >     [javac] location: class 
> > org.globus.ogsa.impl.security.authorization.NoAuthorization
> > 
> >     [javac]         Subject peerSubject,
> > 
> >     [javac]         ^
> > 
> >     [javac] 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/src/org/globus/ogsa/impl/security/authorization/NoAuthorization.java:40: 
> > cannot resolve symbol
> > 
> >     [javac] symbol  : class Subject 
> > 
> >     [javac] location: class 
> > org.globus.ogsa.impl.security.authorization.NoAuthorization
> > 
> >     [javac]         Subject peerSubject,
> > 
> >     [javac]         ^
> > 
> >     [javac] 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/src/org/globus/ogsa/impl/security/authorization/Authorization.java:19: 
> > cannot resolve symbol
> > 
> >     [javac] symbol  : class Subject 
> > 
> >     [javac] location: interface 
> > org.globus.ogsa.impl.security.authorization.Authorization
> > 
> >     [javac]     void authorize(Subject peerSubject,
> > 
> >     [javac]                    ^
> > 
> >     [javac] 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/src/org/globus/ogsa/impl/security/authorization/ServiceAuthorization.java:16: 
> > cannot resolve symbol
> > 
> >     [javac] symbol  : class Subject 
> > 
> >     [javac] location: interface 
> > org.globus.ogsa.impl.security.authorization.ServiceAuthorization
> > 
> >     [javac]         Subject peerSubject,
> > 
> >     [javac]         ^
> > 
> >     [javac] 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/src/org/globus/ogsa/handlers/RPCURIProvider.java:38: 
> > cannot resolve symbol
> > 
> >     [javac] symbol  : class Subject 
> > 
> >     [javac] location: package auth
> > 
> >     [javac] import javax.security.auth.Subject;
> > 
> >     [javac]                            ^
> > 
> >     [javac] 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/src/org/globus/ogsa/handlers/RPCURIProvider.java:300: 
> > cannot resolve symbol
> > 
> >     [javac] symbol  : class Subject 
> > 
> >     [javac] location: class org.globus.ogsa.handlers.RPCURIProvider
> > 
> >     [javac]         Subject subject =
> > 
> >     [javac]         ^
> > 
> >     [javac] 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/src/org/globus/ogsa/handlers/RPCURIProvider.java:301: 
> > cannot resolve symbol
> > 
> >     [javac] symbol  : class Subject 
> > 
> >     [javac] location: class org.globus.ogsa.handlers.RPCURIProvider
> > 
> >     [javac]             (Subject) 
> > msgContext.getProperty(Constants.INVOCATION_SUBJECT);
> > 
> >     [javac]              ^
> > 
> >     [javac] 10 errors
> > 
> >  
> > 
> > BUILD FAILED
> > 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/core-src/impl/java/build.xml:327: 
> > Compile failed; see the compiler error output for details.
> > 
> >  
> > 
> > Total time: 3 minutes 34 seconds
> > 
> >  
> > 
> > Buildfile: build.xml does not exist!
> > 
> > Bundle gt3 successfully installed.
> > 
> > gpt-build ====> CHECKING BUILD DEPENDENCIES FOR globus_core
> > 
> > SKIPPING REBUILD of gcc32dbg
> > 
> > WARNING: "/usr/local/devtools/gt3//" not found
> > 
> > gpt-build ====> CHECKING BUILD DEPENDENCIES FOR globus_gsoap_soapcpp2
> > 
> > gpt-build ====> Changing to 
> > /usr/local/devtools/gt3.0.2-linux-installer/BUILD/globus_gsoap_soapcpp2-0.2/
> > 
> > gpt-build ====> BUILDING FLAVOR gcc32dbg
> > 
> > make distclean
> > 
> > make: *** No rule to make target `distclean'.  Stop.
> > 
> >  
> > 
> >  
> > 
> 
> 
> 
> _______________________________________________
> seek-dev mailing list
> seek-dev at ecoinformatics.org
> http://www.ecoinformatics.org/mailman/listinfo/seek-dev
> 

-- 
Jing Tao
National Center for Ecological
Analysis and Synthesis (NCEAS)
735 State St. Suite 204
Santa Barbara, CA 93101




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