[seek-dev] Re: Uber Build instructions anywhere???

[Matt Jones]

Rod,

This is the sort of question you should send to 
seek-dev at ecoinformatics.org so that other developers can respond.  In 
this case, the code you are working with is under development and Jing 
Tao has done most of it, so is probably the best person to answer that 
question.  It may be that you need to run certain ant tasks in order for 
this to work, but more likely it seems to just be a classpath problem, 
in that the symbol it is trying to resolve (QueryGroup) is in 
metacat.jar, which you said you've built successfully.  Once we get the 
initial system building, I think it would be a good idea to fully 
document the build process for all of the systems, and to make sure 
there is one easy-to-run target in the ant build file that puts 
everything together.  To get there, it would be useful for you to record 
all of the issues you encountered in one place.

Jing -- can you help out with this question?

Matt

Rod Spears wrote:

> I am trying to build the EcoGrid src and feeling quite lost as to what 
> all needs to be in place and where before I can make this happen.
> 
> Is there some master set of instructions?
> 
> I got ecogrid to build as far as MetaCat, so I built MetaCat and placed 
> the metacat.jar into the gt3/lib and now I am getting other errors:
> 
> compileStubs:
> 
> compileImpl:
>     [javac] Compiling 3 source files to 
> S:\seek\projects\ecogrid\build\classes
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:30: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: package metacat
>     [javac] import edu.ucsb.nceas.metacat.QueryGroup;
>     [javac]                               ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:32: cannot resolve symbol
>     [javac] symbol  : class QueryTerm
>     [javac] location: package metacat
>     [javac] import edu.ucsb.nceas.metacat.QueryTerm;
>     [javac]                               ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:189: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]   private void handleANDChildren(QueryGroup metacatParent, 
> ANDType a
> ndParent)
>     [javac]                                  ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:228: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]   private void handleORChildren(QueryGroup metacatParent, 
> ORType orP
> arent)
>     [javac]                                 ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:267: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]   private void handleANDType(QueryGroup parent, ANDType and)
>     [javac]                              ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:283: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]   private void handleORType(QueryGroup parent, ORType or)
>     [javac]                             ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:299: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]   private void handleConditionType(QueryGroup parent, 
> ConditionType
> condition)
>     [javac]                                    ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:78: cannot resolve symbol
>     [javac] symbol  : constructor QuerySpecification (java.lang.String)
>     [javac] location: class edu.ucsb.nceas.metacat.QuerySpecification
>     [javac]                new 
> QuerySpecification(MetaCatUtil.getOption("accNumS
> eparator"));
>     [javac]                ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:144: cannot resolve symbol
>     [javac] symbol  : method handleReturnField (java.lang.String)
>     [javac] location: class edu.ucsb.nceas.metacat.QuerySpecification
>     [javac]          metacatQuery.handleReturnField(returnField);
>     [javac]                      ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:156: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]     QueryGroup query = null;
>     [javac]     ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:162: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]       query = new QueryGroup(INTERSECT);
>     [javac]                   ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:169: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]       query = new QueryGroup(UNION);
>     [javac]                   ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:176: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]       query = new QueryGroup(INTERSECT);
>     [javac]                   ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:275: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]     QueryGroup kid = new QueryGroup(INTERSECT);
>     [javac]     ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:275: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]     QueryGroup kid = new QueryGroup(INTERSECT);
>     [javac]                          ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:291: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]     QueryGroup kid = new QueryGroup(UNION);
>     [javac]     ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:291: cannot resolve symbol
>     [javac] symbol  : class QueryGroup
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]     QueryGroup kid = new QueryGroup(UNION);
>     [javac]                          ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:302: cannot resolve symbol
>     [javac] symbol  : class QueryTerm
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]     QueryTerm term = null;
>     [javac]     ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \EcogridJavaToMetacatJavaQueryTransformer.java:318: cannot resolve symbol
>     [javac] symbol  : class QueryTerm
>     [javac] location: class 
> org.ecoinformatics.ecogrid.metacat.impl.EcogridJavaT
> oMetacatJavaQueryTransformer
>     [javac]     term = new QueryTerm(false, metacatOperator, value, 
> pathString);
> 
>     [javac]                ^
>     [javac] 
> S:\seek\projects\ecogrid\src\org\ecoinformatics\ecogrid\metacat\impl
> \MetacatImpl.java:76: cannot resolve symbol
>     [javac] symbol  : method findDocuments 
> (edu.ucsb.nceas.metacat.QuerySpecific
> ation,java.lang.String,<nulltype>,boolean)
>     [javac] location: class edu.ucsb.nceas.metacat.DBQuery
>     [javac]       Hashtable result = metacat.findDocuments(metacatQuery, 
> "public
> ", null, true);
>     [javac]                                 ^
>     [javac] 20 errors
> 
> BUILD FAILED
> file:S:/seek/projects/ecogrid/build.xml:168: Compile failed; see the 
> compiler er
> ror output for details.
> 
> Total time: 5 seconds
> S:\seek\projects\ecogrid>