[kepler-dev] simple question with rebuilding kepler from sources

Unni Pillai unni.pillai at nyu.edu
Wed Apr 25 08:30:58 PDT 2007


Okay it looks like the source of my problem is that something which  
was deprecated nearly 12 months ago is still being picked up by the  
build process.  I'm going to continue debugging and see if I can fix  
the build locally, but appreciate if the domain experts have the  
correct build files to help out.

the problem is as follows:






On Apr 25, 2007, at 11:17 AM, Unni Pillai wrote:

> Hi Folks
>
> I think my sources are matching the repositories for PTII and  
> Kepler.   I went through the necessary hoops to get it.
>
> I was able to build my PTII correctly and invoke vergil editor and  
> test some demos.  I went ahead and downloaded the kepler sources  
> from cvs account at ecoinformatics and went through steps outlined  
> in the install doc found here http://cvs.ecoinformatics.org/cvs/ 
> cvsweb.cgi/~checkout~/kepler/INSTALL?content-type=text/plain
>
> The problem arises when I go to build kepler (ant buildkarlib)  
> missing MANIFEST.MF kepler/src/actors/ADNToHTMLConversion/ 
> MANIFEST.MF does not exist.
>
> Can somebody verify if this file is missing from the repository or  
> suggest workaround.
>
> asterix:~/Documents/projects/ndiipp-ptv/kepler unni$ echo $KEPLER
> /Users/unni/Documents/projects/ndiipp-ptv/kepler
> asterix:~/Documents/projects/ndiipp-ptv/kepler unni$ echo $PTII
> /Users/unni/Documents/projects/ndiipp-ptv/ptII
> asterix:~/Documents/projects/ndiipp-ptv/kepler unni$ echo $JAVA_HOME
> /Library/Java/Home
> asterix:~/Documents/projects/ndiipp-ptv/kepler unni$ which ant
> /usr/bin/ant
> asterix:~/Documents/projects/ndiipp-ptv/kepler unni$ ant full-clean  
> ptolemy
> Buildfile: build.xml
>
> BUILD SUCCESSFUL
> Total time: 4 minutes 12 seconds
>
>
>
> asterix:~/Documents/projects/ndiipp-ptv/kepler unni$ ant buildkarlib
> BUILD FAILED
> /Users/unni/Documents/projects/ndiipp-ptv/kepler/build.xml:889: The  
> following error occurred while executing this line:
> /Users/unni/Documents/projects/ndiipp-ptv/kepler/build.xml:909:  
> Manifest file: /Users/unni/Documents/projects/ndiipp-ptv/kepler/src/ 
> actors/ADNToHTMLConversion/MANIFEST.MF does not exist.
>
> Total time: 0 seconds
>
>
> Thanks
>
> Unni
>
> On Apr 24, 2007, at 4:24 PM, Christopher Brooks wrote:
>
>> Hi Unni,
>>
>> For information about read access to the ptII repository, see:
>> http://chess.eecs.berkeley.edu/ptexternal/
>>
>> _Christopher
>> --------
>>
>>     Thanks for the response
>>
>>     I guess I'd need access to the CHESS CVS server also. Since  
>> the =20
>>     PtolemyII I built is from sources obtained at PtolemyII  
>> website.  Any =20=
>>
>>     way to get access to these servers today if possible.
>>
>>     Unni
>>
>>
>>     On Apr 24, 2007, at 4:08 PM, Chad Berkley wrote:
>>
>>> If you want to recompile stuff, you'll definitely want the CVS =20
>>> version.  Let me know if no one responds to your cvs account =20
>>> request by tomorrow.  You'll also need to check out ptolemy from =20
>>> the CHESS CVS server.  See the build instructions here: http://=20
>>> cvs.ecoinformatics.org/cvs/cvsweb.cgi/~checkout~/kepler/INSTALL?=20
>>> content-type=3Dtext/plain
>>>
>>> chad
>>>
>>> Unni Pillai wrote:
>>>> Hi Dan
>>>> So to work with nightly build we only need to set the KEPLER =20
>>>> environment variable.  I just need some clarification with how  
>>>> we =20
>>>> go about rebuilding kepler if we touch any kepler java srcs from  
>>>> =20
>>>> the nightly build or should I be working with kepler sources =20
>>>> obtained from the cvs repository?
>>>> I've requested pmc at ecoinformatics.org =20
>>>> <mailto:pmc at ecoinformatics.org> for read access to the cvs =20
>>>> repository.
>>>> Thanks
>>>> Unni
>>>> On Apr 23, 2007, at 4:29 PM, Dan Higgins wrote:
>>>>> Hi,
>>>>>     If you are starting with the nightly zipped version of =20
>>>>> Kepler, all of the needed Ptolemy code has been precompiled and  
>>>>> =20
>>>>> is in the kepler.jar file (both the source and the *.class =20
>>>>> compiled files). You actually do not need the PTII env variable  
>>>>> =20
>>>>> for running kepler since the kepler.jar is in the class path. =20
>>>>> Kepler source code is in the 'src/ subdirectory of the nightly =20
>>>>> build.  As Ilkay suggested, you probably should checkout fresh =20
>>>>> CVS versions and start from there if you plan extensive changes.
>>>>>
>>>>> Ilkay Altintas wrote:
>>>>>> Unni,
>>>>>>
>>>>>> The problem seems to be your PTII variable. To be able to  
>>>>>> build =20
>>>>>> the nightly build from scratch, you need a version of Ptolemy  
>>>>>> in =20=
>>
>>>>>> your home directory (it probably already installs a version)  
>>>>>> and =20=
>>
>>>>>> point the PTII variable to that directory.
>>>>>> You can also request a read-only kepler cvs account from =20
>>>>>> "pmc at ecoinformatics.org <mailto:pmc at ecoinformatics.org>" and =20
>>>>>> check out both kepler and ptolemy to build everything from  
>>>>>> scratch.
>>>>>>
>>>>>> -ilkay
>>>>>>
>>>>>> On Apr 23, 2007, at 12:13 PM, Unni Pillai wrote:
>>>>>>
>>>>>>> Hi
>>>>>>>
>>>>>>> Following Lucas suggestion, I had downloaded the nightly  
>>>>>>> build =20
>>>>>>> (April 18th) and got it up and running using kepler.sh, but =20
>>>>>>> I've run into some silly problems.
>>>>>>>
>>>>>>> Since I plan on doing some hacks locally I decided to be a  
>>>>>>> bit =20
>>>>>>> wild and did the following from a shell ant full-clean ptolemy.
>>>>>>>
>>>>>>> I'm testing on Mac OSX v 10.4.9
>>>>>>> My environment variables are set as follows:
>>>>>>> asterix:~/Documents/projects/ndiipp-ptv/kepler unni$ echo  
>>>>>>> $KEPLER
>>>>>>> /Users/unni/Documents/projects/ndiipp-ptv/kepler
>>>>>>> *asterix:~/Documents/projects/ndiipp-ptv/kepler unni$ echo  
>>>>>>> $PTII*
>>>>>>> */Users/unni/Documents/projects/ndiipp-ptv/kepler/build*
>>>>>>> asterix:~/Documents/projects/ndiipp-ptv/kepler unni$ echo =20
>>>>>>> $JAVA_HOME
>>>>>>> /Library/Java/Home
>>>>>>>
>>>>>>> My concern is did the nightly build bring in the appropriate =20
>>>>>>> Ptolemy sources or am I missing some step since not sure if =20
>>>>>>> Ptolemy came through or most likely I set my PTII environment  
>>>>>>> =20
>>>>>>> variable incorrectly.
>>>>>>>
>>>>>>> I'm getting whole slew of errors when I attempt to build
>>>>>>> BUILD FAILED
>>>>>>> /Users/unni/Documents/projects/ndiipp-ptv/kepler/build.xml: 
>>>>>>> 748: =20=
>>
>>>>>>> The following error occurred while executing this line:
>>>>>>> /Users/unni/Documents/projects/ndiipp-ptv/kepler/build-=20
>>>>>>> ptolemy.xml:106: /Users/unni/Documents/projects/ndiipp-ptv/=20
>>>>>>> kepler/build/ptolemy/distributed/config not found.
>>>>>>>
>>>>>>> Something is fishy with my PTII variable
>>>>>>> Can someone point me to the correct environment variable  
>>>>>>> setup =20
>>>>>>> for working with nightly builds.
>>>>>>>
>>>>>>> Thanks
>>>>>>>
>>>>>>> Unni
>>>>>>>
>>>>>>> P.S.  My previous postings to kepler dev list never show up, =20
>>>>>>> hence decided to contact you folks who do development with  
>>>>>>> the =20
>>>>>>> nightly builds or build from source.
>>>>>>>
>>>>>>> Also as reference this is how my kepler directory looks after  
>>>>>>> =20
>>>>>>> ant clean
>>>>>>>
>>>>>>> asterix:~/Documents/projects/ndiipp-ptv/kepler unni$ ls -l
>>>>>>> total 656
>>>>>>> -rw-r--r--    1 unni  unni    6802 Apr 23 13:59 INSTALL
>>>>>>> -rw-r--r--    1 unni  unni    7005 Apr 23 13:59 README.txt
>>>>>>> -rw-r--r--    1 unni  unni     991 Apr 23 13:59 UDF_skolem.class
>>>>>>> -rw-r--r--    1 unni  unni     736 Apr 23 13:59 UDF_split.class
>>>>>>> -rw-r--r--    1 unni  unni    3497 Apr 23 13:59 build-doc.xml
>>>>>>> -rw-r--r--    1 unni  unni   20897 Apr 23 13:59 build- 
>>>>>>> ptolemy.xml
>>>>>>> -rw-r--r--    1 unni  unni    5146 Apr 23 13:59 build-scia.xml
>>>>>>> -rw-r--r--    1 unni  unni   66921 Apr 23 13:59 build.xml
>>>>>>> drwxr-xr-x    6 unni  unni     204 Apr 23 13:59 cog
>>>>>>> drwxr-xr-x    4 unni  unni     136 Apr 23 13:58 configs
>>>>>>> -rw-r--r--    1 unni  unni    1230 Apr 23 13:59 copyright.txt
>>>>>>> drwxr-xr-x    7 unni  unni     238 Apr 23 13:58 demos
>>>>>>> drwxr-xr-x    4 unni  unni     136 Apr 23 13:59 dev
>>>>>>> drwxr-xr-x    4 unni  unni     136 Apr 23 13:58 doc
>>>>>>> -rw-r--r--    1 unni  unni    3583 Apr 23 13:59 hsql-license.txt
>>>>>>> -rw-r--r--    1 unni  unni      59 Apr 23 13:59 hsqlTool.bat
>>>>>>> -rw-r--r--    1 unni  unni    4418 Apr 23 13:59 kepler.bat
>>>>>>> -rw-r--r--    1 unni  unni    4394 Apr 23 13:59 kepler.sh
>>>>>>> -rw-r--r--    1 unni  unni     121 Apr 23 13:59 keplerLog4J.log
>>>>>>> drwxr-xr-x   50 unni  unni    1700 Apr 23 13:58 lib
>>>>>>> -rw-r--r--    1 unni  unni  143360 Apr 23 13:59 libexpat.dll
>>>>>>> -rw-r--r--    1 unni  unni    2012 Apr 23 13:59 log4j.properties
>>>>>>> -rw-r--r--    1 unni  unni    4397 Apr 23 13:59 momlexecute.sh
>>>>>>> drwxr-xr-x    5 unni  unni     170 Apr 23 13:57 plugins
>>>>>>> drwxr-xr-x   11 unni  unni     374 Apr 23 13:58 src
>>>>>>> -rw-r--r--    1 unni  unni   14379 Apr 23 13:59 start.html
>>>>>>> drwxr-xr-x   12 unni  unni     408 Apr 23 13:58 webservice
>>>>>>> drwxr-xr-x    4 unni  unni     136 Apr 23 13:58 website
>>>>>>> drwxr-xr-x   24 unni  unni     816 Apr 23 13:58 workflows
>>>>>>> drwxr-xr-x    3 unni  unni     102 Apr 23 13:58 zipdir
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> *Unni Pillai* *|* Software Engineer / Analyst | Digital  
>>>>>>> Library =20=
>>
>>>>>>> <http://library.nyu.edu/diglib/> | NDIIPP-PDPTV <http://=20
>>>>>>> www.ptvdigitalarchive.org/purpose/> =E2=9C=89  
>>>>>>> unni.pillai at nyu.edu =20
>>    =
>>
>>>>>>> <mailto:unni.pillai at nyu.edu> | =E2=9C=86 (212) 992-9741 |  
>>>>>>> AIM: =20
>>>>>>> upillai at mac.com <mailto:upillai at mac.com> | Jabber: =20
>>>>>>> unni.pillainyc at gmail.com <mailto:unni.pillainyc at gmail.com>
>>>>>>>
>>>>>>>
>>>>>>
>>>>>> --=20
>>>>>> Ilkay ALTINTAS
>>>>>> Lab Director, Scientific Workflow Automation Technologies (SWAT)
>>>>>> San Diego Supercomputer Center(SDSC), UCSD
>>>>>> 9500 Gilman Drive, MC: 0505  La Jolla, CA  92093-0505
>>>>>> phone: (858) 822-5453                        fax: (858) 534-8303
>>>>>> web: http://users.sdsc.edu/~altintas <http://users.sdsc.edu/%=20
>>>>>> 7Ealtintas>
>>>>>>
>>>>>>
>>>>>> ----------------------------------------------------------------- 
>>>>>> --=20
>>    =
>>
>>>>>> -----
>>>>>>
>>>>>> _______________________________________________
>>>>>> Kepler-dev mailing list
>>>>>> Kepler-dev at ecoinformatics.org
>>>>>> http://mercury.nceas.ucsb.edu/ecoinformatics/mailman/listinfo/=20
>>>>>> kepler-dev
>>>>>>
>>>>>
>>>>>
>>>>> --=20
>>>>> ****************************************************************** 
>>>>> *
>>>>> Dan Higgins                                   
>>>>> higgins at nceas.ucsb.edu
>>>>> http://www.nceas.ucsb.edu/    Ph: 805-893-5127
>>>>> National Center for Ecological Analysis and Synthesis (NCEAS) =20
>>>>> Marine Science Building - Room 3405
>>>>> Santa Barbara, CA 93195
>>>>> ****************************************************************** 
>>>>> *
>>>> ------------------------------------------------------------------- 
>>>> --=20
>>    =
>>
>>>> ---
>>>> _______________________________________________
>>>> Kepler-dev mailing list
>>>> Kepler-dev at ecoinformatics.org
>>>> http://mercury.nceas.ucsb.edu/ecoinformatics/mailman/listinfo/=20
>>>> kepler-dev
>
> _______________________________________________
> Kepler-dev mailing list
> Kepler-dev at ecoinformatics.org
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> kepler-dev

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