[kepler-dev] sources for phylogenentic data portals

[Zhijie Guan]

Hi Jianting,

For the data portal of phylogenetic trees, you may want to check  
TreeBase at www.treebase.org. TreeBase now is part of the CIPRes  
project (www.phylo.org). If you are interested, I can connect you  
with the TreeBase group in SDSC/UCSD.

Some workflows for phylogenetic data analyses have been constructed  
as part of the collaboration of CIPRes and Kepler. You can check them  
out at http://www.phylo.org/sub_sections/software.htm. Let me know if  
you want more information about them.

Thanks!

Zhijie Guan
guan at sdsc.edu



On Aug 17, 2006, at 9:16 AM, Jianting Zhang wrote:

> Hi,
>
>
>
> I’m working towards building a demonstrative workflow to relate  
> geospatial data (temperature/NDVI) with phylogenetic data for  
> biodiversity studies (the idea is similar to  
> www.journals.royalsoc.ac.uk/index/H2BJF1MJ3YAW29P1.pdf).
>
>
>
> I know many Kepler developers/users have bioinformatics/ 
> phylogenentic backgrounds. Can anyone familiar with phylogenentic  
> data portals point me to some sources (especially phylogenentic  
> tree data of flowering plants).
>
>
>
> Thanks and Best Regards
>
>
>
> Jianting Zhang
>
>
>
> LNO/UNM
>
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> kepler-dev

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