[kepler-dev] kepler build issues with jar files
Rod Spears
rods at ku.edu
Sat Oct 30 16:55:15 PDT 2004
I spent a lot of time on this on Friday. I tried all kinds of things.
The only thing I discovered was that order mattered.
For example, I was trying to get Eclipse to work on Windows. I
discovered that I needed to add all the jars in the kepler/lib/jar dir
first and then all the sub-dirs.
Rod
Matt Jones wrote:
> Dan,
>
> I seem to be having trouble running kepler from ant, especially if I
> do a clean build (see stack trace below). It seems to be related to
> the fact that we have multiple, different versions of the log4j jar
> files, and now that your new classpath is in place the order fo jar
> imports seems broken. Thi sis probably fixed by eliminating the
> offending versions of log4j that we don't need. There are other
> duplicates as well that need to be reviewed carefully (e.g.,
> axis.jar). Is anyone else seeing these runtime problems?
>
> Matt
>
> Here's the error I get:
> [java] Opening user library
> /home/jones/.ptolemyII/UserLibrary.xml... Done
> [java] java.lang.VerifyError: (class: org/apache/log4j/Category,
> method: getRoot signature: ()Lorg/apache/log4j/Category;) Wrong return
> type in function
> [java] at
> org.apache.commons.logging.impl.Log4jFactory.getInstance(Log4jFactory.java:140)
>
> [java] at
> org.apache.commons.logging.impl.LogFactoryImpl.getInstance(LogFactoryImpl.java:257)
>
> [java] at
> org.apache.commons.logging.LogFactory.getLog(LogFactory.java:390)
> [java] at
> com.hp.hpl.jena.rdf.model.impl.PropertyImpl.<clinit>(PropertyImpl.java:58)
>
> [java] at
> com.hp.hpl.jena.enhanced.BuiltinPersonalities.<clinit>(BuiltinPersonalities.java:28)
>
> [java] at
> com.hp.hpl.jena.rdf.model.impl.ModelCom.<init>(ModelCom.java:50)
> [java] at
> com.hp.hpl.jena.rdf.model.ModelFactory.createDefaultModel(ModelFactory.java:119)
>
> [java] at
> com.hp.hpl.jena.rdf.model.ModelFactory.createDefaultModel(ModelFactory.java:113)
>
> [java] at com.hp.hpl.jena.vocabulary.OWL.<clinit>(OWL.java:37)
> [java] at
> com.hp.hpl.jena.ontology.ProfileRegistry.<clinit>(ProfileRegistry.java:48)
>
> [java] at
> com.hp.hpl.jena.ontology.OntModelSpec.<clinit>(OntModelSpec.java:55)
> [java] at
> org.ecoinformatics.seek.sms.AnnotationEngine.initialize(AnnotationEngine.java:133)
>
> [java] at
> org.ecoinformatics.seek.sms.AnnotationEngine.<init>(AnnotationEngine.java:100)
>
> [java] at
> org.ecoinformatics.seek.sms.AnnotationEngine.instance(AnnotationEngine.java:110)
>
> [java] at
> org.ecoinformatics.seek.ecogrid.TabbedLibraryPane.<init>(TabbedLibraryPane.java:107)
>
> [java] at
> org.ecoinformatics.seek.ecogrid.TabbedLibraryPane$Factory.createLibraryPane(TabbedLibraryPane.java:243)
>
> [java] at
> org.ecoinformatics.seek.ecogrid.LibraryPaneFactory.createLibraryPane(LibraryPaneFactory.java:119)
>
> [java] at
> ptolemy.vergil.basic.BasicGraphFrame.<init>(BasicGraphFrame.java:352)
> [java] at
> ptolemy.vergil.basic.ExtendedGraphFrame.<init>(ExtendedGraphFrame.java:100)
>
> [java] at
> ptolemy.vergil.actor.ActorGraphFrame.<init>(ActorGraphFrame.java:124)
> [java] at
> ptolemy.vergil.actor.ActorGraphTableau.<init>(ActorGraphTableau.java:105)
> [java] at
> ptolemy.vergil.actor.ActorGraphTableau$Factory.createTableau(ActorGraphTableau.java:162)
>
> [java] at
> ptolemy.actor.gui.PtolemyTableauFactory.createTableau(PtolemyTableauFactory.java:98)
>
> [java] at
> ptolemy.actor.gui.TableauFactory.createTableau(TableauFactory.java:122)
> [java] at
> ptolemy.actor.gui.Configuration.createPrimaryTableau(Configuration.java:193)
>
> [java] at
> ptolemy.actor.gui.TableauFrame$1.actionPerformed(TableauFrame.java:349)
> [java] at
> javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1786)
> [java] at
> javax.swing.AbstractButton$ForwardActionEvents.actionPerformed(AbstractButton.java:1839)
>
> [java] at
> javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:420)
>
> [java] at
> javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:258)
> [java] at
> javax.swing.AbstractButton.doClick(AbstractButton.java:289)
> [java] at
> javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1113)
> [java] at
> javax.swing.plaf.basic.BasicMenuItemUI$MouseInputHandler.mouseReleased(BasicMenuItemUI.java:943)
>
> [java] at
> java.awt.Component.processMouseEvent(Component.java:5100)
> [java] at java.awt.Component.processEvent(Component.java:4897)
> [java] at java.awt.Container.processEvent(Container.java:1569)
> [java] at
> java.awt.Component.dispatchEventImpl(Component.java:3615)
> [java] at
> java.awt.Container.dispatchEventImpl(Container.java:1627)
> [java] at java.awt.Component.dispatchEvent(Component.java:3477)
> [java] at
> java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:3483)
> [java] at
> java.awt.LightweightDispatcher.processMouseEvent(Container.java:3198)
> [java] at
> java.awt.LightweightDispatcher.dispatchEvent(Container.java:3128)
> [java] at
> java.awt.Container.dispatchEventImpl(Container.java:1613)
> [java] at java.awt.Window.dispatchEventImpl(Window.java:1606)
> [java] at java.awt.Component.dispatchEvent(Component.java:3477)
> [java] at java.awt.EventQueue.dispatchEvent(EventQueue.java:456)
> [java] at
> java.awt.EventDispatchThread.pumpOneEventForHierarchy(EventDispatchThread.java:201)
>
> [java] at
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:151)
>
> [java] at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:145)
> [java] at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:137)
> [java] at
> java.awt.EventDispatchThread.run(EventDispatchThread.java:100)
> [java] ANNOTATION ENGINE: loading ontologies and annotations ...
>
>
> _______________________________________________
> kepler-dev mailing list
> kepler-dev at ecoinformatics.org
> http://www.ecoinformatics.org/mailman/listinfo/kepler-dev
--
Rod Spears
Biodiversity Research Center
University of Kansas
1345 Jayhawk Boulevard
Lawrence, KS 66045, USA
Tel: 785 864-4082, Fax: 785 864-5335
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